KEGG   Citrobacter farmeri: CI104_09695
Entry
CI104_09695       CDS       T05012                                 
Symbol
clpV
Name
(GenBank) ClpV1 family T6SS ATPase
  KO
K11907  type VI secretion system protein VasG
Organism
cfar  Citrobacter farmeri
Pathway
cfar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cfar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CI104_09695 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cfar02044]
    CI104_09695 (clpV)
Secretion system [BR:cfar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CI104_09695 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 nSTAND3 AAA_25 AAA_7 NACHT ATPase_2 AAA_24 Zeta_toxin bpMoxR Sigma54_activat TniB IstB_IS21 Clp_N AAA_14 SRP54 AAA_11 NBD_SMAX1 AAA_6 Oxidored_molyb
Other DBs
NCBI-ProteinID: AST79333
LinkDB
Position
1962266..1964917
AA seq 883 aa
MENSAVLLRRLNPYCARALEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEW
DMDGMWQALLGWLDTLPRSVRSRPALADSLNALLKQAWMMASLQNEEQIRSQHLLMALTE
SPKLIRCDGLWPLLTLGQSQLERLRPLLDVQSDERPDVQQEEELAQGHGGDVEIIGRPAG
AEVKEGELSPALQNVLDKFTLDVTAKAREGKIDPVFGRDTEIRQMVDILSRRRKNNPILV
GEPGVGKTALVEGLALRIAEGNVPESLKPVILRTLDLGLLQAGAGVKGEFEQRLKNVIDA
VQQSPVPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFER
DAALERRFQMVKVDEPDDDSACLMLRGLKSRYAEHHNVHITDAAVRAAVTLSRRYLTGRQ
LPDKAVDLLDTASARVRMSLDTVPESLTHIRAQITALEMEKQALLEDIAFGNHAHGERLA
TIEQEENALIVALDELETQYGEELKLTEQLLETRQDISRQAETQALQQQLNGMQRSNPLL
AVDVDVRTVATVIADWTGVPLSSLLKDEQTELLTLENEIGKRVVGQDVALTAIAQRLRAA
KTGLTSENGPQGVFLLVGPSGTGKTETALTLADVMYGGEKSLITINLSEYQEPHTVSQLK
GSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREI
DFRNTVILMTSNLGSDPLMQLLGEKPDATEGELHELLRPILRDHFQPALLARFQTVIYRP
LAETAMRTIVEMKLAHVSKRLHRHYGLLTQIDESLYDALTSACLLPDTGARNVDSLLNQQ
ILPVLSQQLLRHMAAKQKPTTLTLGWSEEEGIALEFDAARGEG
NT seq 2652 nt   +upstreamnt  +downstreamnt
atggaaaactcagccgtcctgttacgccgtcttaatccgtactgcgcccgcgcgctggaa
ggggcagcctccctgtgtcagacccgggcgcatgccgaaattcttccggagcactggttg
ctcaagctactggagcagggcgaaggcgacctcacggtgctggcccgccgctacgaatgg
gatatggacggtatgtggcaggcgttgctgggctggctggatacacttccgcgctcggtg
cgcagccgtccggcgcttgcggactcgcttaacgcgctgctgaaacaggcatggatgatg
gcctcattgcagaatgaggaacaaatccgcagtcagcacctgctgatggccctgacggaa
agcccgaaacttatccgctgcgacggcctgtggccactgctgactctcggtcagagccag
cttgaacgtttacgtccgctgctggatgtacagtcggacgagcgtccggacgtgcagcag
gaagaagagctggcgcagggtcatggcggagatgtggaaatcatcggtcgcccggcaggt
gcggaagtgaaggaaggcgaactgagcccggcattgcagaacgtgctggacaagttcacc
ctcgacgttaccgctaaagccagagaaggcaaaatcgacccggtgttcgggcgtgacacg
gaaattcgccagatggtggatattctctcgcgtcgtcgtaaaaacaacccgattctggtc
ggcgagcctggcgtcggtaaaaccgcgctggtcgaaggcctggcgctgcgtatcgccgaa
gggaacgtgccggaaagcctcaaaccggtcatcctgcgcacccttgacctcggcctgctg
caggcgggcgcgggggtgaagggcgaatttgaacagcgtctgaagaatgtgattgatgcc
gttcagcagtccccggtgccggttttgctgtttatcgacgaagcgcacaccatcatcggc
gcgggcaaccaggcgggcggcgcggatgcggccaacctgctgaaacccgcactcgcccgt
ggcgaactgcgtaccatcgccgccaccacctggtcggaatacaaacaatatttcgaacgt
gatgcggcactcgaacgccgcttccagatggtgaaagtcgatgagccggacgacgacagc
gcctgcctgatgctcagagggctgaaatcccgctatgccgaacatcataacgtgcacatc
accgacgcggcggtacgcgccgccgtcaccctttcccgccgttacttaacaggccgccaa
ctgccggacaaagccgttgacctgctggacaccgcttccgcccgcgtgcgcatgagcctc
gacaccgtgccggagtcgctcacccacatccgcgcgcaaatcaccgcgcttgaaatggaa
aaacaggcgctgctggaagacattgctttcggcaaccatgcgcacggtgaacgcctggcg
accatcgaacaggaagaaaacgcgttgattgttgcgctcgacgaactggaaacccagtat
ggcgaagagctgaaactgaccgaacaactgctggaaacccgccaggatatatcccgtcag
gctgaaacgcaggccctgcaacagcaactgaacggcatgcagcgcagcaacccgctgctg
gcagtggatgtggacgtgcgtactgttgctaccgtcatcgccgactggaccggcgtgccg
ctgtcttcactgctgaaagacgaacagaccgaactactgacgctggaaaatgaaatcggc
aaacgcgtggttggccaggacgtggcgctcaccgccattgcccagcgcctgcgtgccgcc
aaaaccgggctgacctccgagaacggcccgcagggcgtgttcctgctggttggcccgagc
ggcaccggtaaaaccgaaaccgcgctgacgctggctgatgtcatgtacggcggcgaaaaa
tccctgatcaccattaacctctccgagtaccaggagccacacaccgtctcccaactgaaa
ggttcgccgccgggctacgtcggctacggccaggggggaatcctcaccgaagcggtgcgc
aaacgcccgtacagcgtggtgctgctggatgaagtggaaaaagcgcaccgcgacgtgatg
aacctgttttatcaggtgtttgaccggggctttatgcgcgacggcgaagggcgtgaaata
gacttccgcaacaccgtgatcctgatgacctccaacctaggcagcgaccccctgatgcag
ttattgggtgaaaagccggacgccaccgaaggcgaactgcacgaactgctgcgccccatc
ctgcgcgatcatttccagcccgcgctgctggcgcgttttcagaccgtgatttaccgcccg
ctggcggaaacagcgatgcgcaccatcgtcgaaatgaaacttgctcatgtcagcaagcgc
ctgcatcgccattacggcctgctcacgcagatcgacgagagcctgtacgacgcactcact
tccgcctgcctgctgccggacaccggcgcgcgcaacgtcgacagcctgctcaatcagcaa
atcctgccggtactgagccagcagttacttcgccatatggccgcgaaacagaagccgacg
acgctgacgctgggatggagtgaagaagagggaattgcgcttgagtttgatgcagccaga
ggagaaggatga

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