Citrobacter farmeri: CI104_13175
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Entry
CI104_13175 CDS
T05012
Symbol
benD
Name
(GenBank) 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
KO
K05783
dihydroxycyclohexadiene carboxylate dehydrogenase [EC:
1.3.1.25
1.3.1.-]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00362
Benzoate degradation
cfar00364
Fluorobenzoate degradation
cfar00622
Xylene degradation
cfar01100
Metabolic pathways
cfar01120
Microbial metabolism in diverse environments
cfar01220
Degradation of aromatic compounds
Module
cfar_M00551
Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CI104_13175 (benD)
00364 Fluorobenzoate degradation
CI104_13175 (benD)
00622 Xylene degradation
CI104_13175 (benD)
Enzymes [BR:
cfar01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.25 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
CI104_13175 (benD)
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Motif
Pfam:
adh_short_C2
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AST79956
UniProt:
A0A8H9P1D8
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All DBs
Position
complement(2634723..2635496)
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AA seq
257 aa
AA seq
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MRFNDKVVAITGAAQGIGRQTAIQAAQEGARLLLIDRSRHVHELAATLASGGCQVLALEA
DLEQWESTEQVFAAGVAHFGQLDVLVNNVGGTIWARPFAEYQPDQIEKEIRRSLFPTLWG
CRAALPWMLKQGHGSIVNISSVATGGVNRVPYSAAKGGVNALTRSIAMEYSGSGIRINAV
APGGTDAPARLVPRNEETPSAQEQAWYQQVIDQTLDSSLMHRYGTLTEQANAILFLASDD
ASYITGVTLPVAGGDLG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttaacgataaagtcgtggcaattaccggcgcagcgcaggggattggccgccag
acggctattcaggcggcacaagagggggcgcggttgttacttatcgatcgttcccgtcac
gtccatgaactggcggccacgctggcgtccggcgggtgtcaggtgctggcgctggaggcg
gatctggaacaatgggaaagcaccgaacaggtttttgccgccggcgtcgcgcattttggt
caactggacgtgctggtgaataacgtcggagggaccatctgggcccgcccgtttgctgaa
tatcagccggatcagattgagaaagagatccgccgttcgctgttcccgacgctgtggggg
tgtcgtgccgcgctgccgtggatgctgaaacaagggcacggcagtattgtgaatatctct
tccgtcgccacgggcggggtgaatcgcgtgccgtactcggcggcgaagggcggcgtcaac
gcgctaacacgatcgattgcgatggagtacagcgggagcggcattcgtattaacgccgta
gcacccggagggaccgatgccccggcgcgtctcgtaccgcgtaatgaggaaacgccatct
gcccaggagcaggcgtggtatcagcaggtgattgatcaaaccctcgacagcagtctgatg
caccgctacggaacgctgacggagcaggcgaatgcgattctgtttctcgccagcgatgac
gccagctatatcaccggcgtcaccttaccggttgccggaggcgatctcggttga
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