Citrobacter farmeri: CI104_14040
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Entry
CI104_14040 CDS
T05012
Name
(GenBank) GGDEF domain-containing protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CI104_14040
Enzymes [BR:
cfar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CI104_14040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_8
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AST80116
UniProt:
A0A8H9NVH7
LinkDB
All DBs
Position
2824386..2826377
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AA seq
663 aa
AA seq
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MKDILESATLYSYMGTHTPYWRLSEDSNTLHLSVTEATDRTESVELAPEQAERIREMTVI
TSSLMMTLPFDDNDIPVHLVGRKISKHEWAGSASAWHDTPSVARDLVKGLSFAEQVVSEA
NSAIVILDSRGNIQRFNRLCEEYTGLKEQEVIGQSVFKLFMSRREAAASRRNISGFFRNG
NSYEVELWVQTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHELINDAIGKAGDSQVGIVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLEENQVLARLGGDEFIVLASQTSQSSLEAVASRILTRLRQPFRIGLIEVYTGCSAGI
AMAPQHGESSGDLIRNADTAMYTVKEGGRGQFCVFSPEMNERVFEYLWLDTNLRKALEND
QLLIHYQPKVTWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVV
RQVAKWRDKGINLRVAVNISARQLADQTIFTDLKRVLHELNFEYCPIDVELTESCLIENE
ALALSVIQQFSQLGAQVHLDDFGTGYSSLSQLTRFPIDAIKLDQVFVHDIHKKSVSQSMV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPAAVFERWYRRYLNK
KKR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacattctggagtccgcaacgttgtatagctatatgggcactcacacgccttac
tggcgtttgtcagaagattccaacaccctacatttgtccgtcaccgaagcgaccgatcgt
acggagagcgttgaacttgcgcccgagcaagccgaacggatccgcgaaatgaccgtcatc
acatccagcctgatgatgacgctcccctttgatgacaacgatattccggtgcatttggtg
ggccgtaaaatcagtaaacatgaatgggcaggcagcgcatcggcctggcatgatacgcct
tctgtggcgcgcgatctggtcaaaggactgtcgtttgctgaacaggtggtgtctgaagcc
aactcagccatcgtgatcctcgacagtcggggcaatattcagcgcttcaaccgcctgtgt
gaagagtacaccgggctgaaagagcaagaggtcattggccagagcgtcttcaaacttttt
atgagtcgtcgggaggccgccgcctcacgtcgcaacatcagcggcttctttcgcaacggc
aattcgtatgaagttgagctctgggttcaaacccgcaaaggccagcgactgtttctgttc
cgcaataaatttgtccacagcggcagcgggaagaatgaaatctatctgatctgctccggc
actgatatcactgaagagcggcgcgcgcaggagcggttacgcgtgctggcgaataccgat
acgattaccggtctgccaaaccgcaatgctatccatgaactgatcaatgacgctatcggg
aaagccggtgatagccaggtgggcattgtttatctcgacctggataatttcaagaaggtg
aatgatgcctatggtcatatgttcggtgaccagcttctacaggcagtgtcgttagcgatc
ctgagttgcctggaagagaatcaagtgctggcgcgtctcggcggtgatgagttcattgta
ctggccagccagacgtcgcagagttcgcttgaggcggtcgcctcgcggatccttacccga
ttgcgtcagcccttccgtatcggcctgatagaagtctatacaggctgttctgccggtatc
gcaatggcacctcagcacggcgagagcagcggcgacctgatccgcaacgccgataccgcg
atgtacaccgtaaaagaaggcggacgcggccagttctgcgttttctcgccggagatgaac
gagcgcgtattcgaatacctgtggctggacaccaacctgcgcaaagcactggaaaacgat
cagctgctgattcactaccagccgaaagtgacctggcgaggtgaagttcgcagtcttgag
gcactggtgcgctggcagtccccagaacgcgggcttatcccgccgctggagttcatctct
tacgccgaggagtccgggctgattgtgccactcggccgctgggtgatcctcgacgtggtg
cgccaggtggcgaaatggcgtgataagggtattaacctgcgcgtggcagttaacatctct
gcccgccaactggccgatcagacaattttcaccgacctgaagcgagtgctgcacgaactc
aattttgaatattgccctattgacgtcgagctgacagaaagttgcctgattgaaaatgaa
gcgcttgcgctgtccgtcattcaacagttcagccaactcggcgcccaggtacacctcgat
gactttggtaccggctattcctcgctttcgcaactcacgcggttcccgattgatgccatc
aagctggatcaggttttcgtccatgacattcataaaaaatcggtatcgcagtcaatggtc
cgtgcgatcgtcgcggtggcgcaggcgttaaatttacaggtgattgccgaaggggtggag
agtgccaaagaggatgcttttctgacaaaaaatggcgtcaatgaacgacaaggtttttta
tttgccaaaccgatgcctgccgccgtgtttgagcgctggtacagacgttatctcaacaag
aaaaagcgttaa
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