Citrobacter farmeri: CI104_14070
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Entry
CI104_14070 CDS
T05012
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
CI104_14070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_7
TPR_2
TPR_14
Zn_ribbon_LapB
TPR_8
TPR_12
TPR_1
TPR_16
ARM_TT21_5th
TPR_6
TPR_CcmH_CycH
ANAPC3
ARM_TT21_N
TPR_20
ARM_TT21
TPR_11
NatA_aux_su
TPR_9
HEAT_Nup120
TPR_NUP160_120_M
TPR_21
TPR_NPHP3
T4SS_TraI
DUF7178
ARM_TT21_C
SPG48
ARM_TT21_2nd
Motif
Other DBs
NCBI-ProteinID:
AST80121
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Position
complement(2829433..2830602)
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AA seq
389 aa
AA seq
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MLELLFLLLPVAAAYGWYMGRRSAQQTKQDEANRLSRDYVAGVNFLLSNQQDKAVDLFLD
MLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLAVQQLGRDYMAA
GLYDRAEDMFNQLTDETDFRVGALQQLLQIYQATSDWQKAIEVAERLVKLGKDKQRIEIA
HFYCELALQQMGSDDMDRAMALLKKGAAADKNSARVSIMMGRVWMAKGDYAKAVECLQRV
ISQDKELVSETLEMLQTCYQQLGKNDEWAEFLRRAVEENTGAAAELMLADILETREGTET
AQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRAKESLMVLRDMVGEQVRSKPRYRCSKC
GFTAYTLYWHCPSCRAWSTIKPIRGLDGL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgctggagttgttgtttctgcttttacctgttgccgccgcctacggctggtatatgggt
cgcagaagtgcgcaacaaacaaaacaggacgaagctaaccgtctttcccgcgattacgtc
gcgggtgttaacttccttctgagcaaccaacaagataaagcggtggatctgttcctcgat
atgttgaaagaggataccggcaccgttgaggctcatctcaccctcggaaacctgtttcgt
tctcgcggcgaagttgaccgtgccatccgtattcatcaaaccctcatggaaagcgcctca
ctgacctatgaacagcgactgctggcggttcagcagttagggcgtgattacatggccgcg
ggtttgtatgaccgggcggaggatatgttcaatcagcttactgatgaaacagattttcgc
gtaggcgcgttgcagcaactgttgcagatttatcaggcgaccagcgactggcagaaggcc
attgaggttgccgaacgactggtcaaactgggtaaagacaaacagcgcatcgaaatcgcc
catttttactgtgaactggcgctacagcagatgggtagcgacgacatggatcgcgccatg
gcgctgctgaaaaaaggggctgcggcggataagaatagtgccagggtctctatcatgatg
ggccgcgtctggatggcgaagggcgattacgcgaaggccgttgaatgtctccagcgggtg
atttctcaggataaagaactggtcagcgaaacgctggaaatgctccagacctgctaccaa
cagttaggcaaaaatgatgaatgggcggaattcctgcgccgtgcggtagaagagaatacc
ggtgctgccgcagaactgatgctggccgatattctcgaaactcgcgaagggacggagacc
gcacaggtctatattacccgccagctccagcgtcatccgacgatgcgcgtcttccataag
ctgatggattatcaccttaacgaagccgaagagggccgtgcgaaagagagcctgatggtg
ctgcgtgatatggtgggcgaacaggtacgcagcaaaccgcgctaccgctgttctaaatgc
ggtttcaccgcctataccctgtactggcactgtccttcctgtcgcgcatggtcaacgatt
aagccaattcgcggacttgatggactgtaa
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