Citrobacter farmeri: CI104_15280
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Entry
CI104_15280 CDS
T05012
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
cfar
Citrobacter farmeri
Pathway
cfar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CI104_15280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfar03400
]
CI104_15280
DNA repair and recombination proteins [BR:
cfar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CI104_15280
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AST80339
UniProt:
A0A8H9NST4
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All DBs
Position
3057083..3057745
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AA seq
220 aa
AA seq
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MLRIIDTETCGLQGGIVEIASVDVVDGKIVNPMSHLVRPDRPISPQAMAIHRITEAMVAD
KPWIEDVIPHYYGSEWYVAHNASFDRRVLPDMPGEWICTMKLSRRLWPGIKYSNMALYKS
RKLNVQTPVGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPGLLTTFTFGKYR
GKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLDNA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcatcatcgatactgaaacctgcggcctgcagggcgggattgtagaaatcgcc
tctgtcgacgtggttgacggtaagattgtgaaccctatgagccacctggtgcgccccgac
cgaccgatctcgccccaggccatggcgattcatcgcattactgaagcaatggtggcggat
aagccctggattgaagacgtcatcccccactattacggtagtgaatggtatgtggcgcat
aacgccagctttgaccgtcgcgtgctgccagacatgccgggagaatggatttgcaccatg
aagctttcccgccgcctctggccgggtattaagtacagcaatatggcgctctacaaatct
cgtaaactgaacgtgcaaacccctgtgggactgcaccaccaccgcgcactttatgactgc
tatatcaccgccgcgctgctaatcgatattatgaatacctcaggctggacggcggaacaa
atggctgacatcaccgggcgaccggggttgctgactacctttacctttggcaagtatcgc
ggcaaagccgtctcggatgtcgctgaacgcgatccgggctatctgcgctggctgtttaac
aaccttgacagcatgagcccggaactgcgtttaactctcaagcactatctggataacgct
taa
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