Citrobacter farmeri: CI104_15385
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Entry
CI104_15385 CDS
T05012
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CI104_15385 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cfar01007
]
CI104_15385 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfar03016
]
CI104_15385 (aspS)
03029 Mitochondrial biogenesis [BR:
cfar03029
]
CI104_15385 (aspS)
Enzymes [BR:
cfar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
CI104_15385 (aspS)
Amino acid related enzymes [BR:
cfar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CI104_15385 (aspS)
Transfer RNA biogenesis [BR:
cfar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CI104_15385 (aspS)
Prokaryotic type
Other AARSs
CI104_15385 (aspS)
Mitochondrial biogenesis [BR:
cfar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CI104_15385 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AST80360
UniProt:
A0A8H9NSK2
LinkDB
All DBs
Position
complement(3078339..3080126)
Genome browser
AA seq
595 aa
AA seq
DB search
MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLA
SELRNEFCIQVTGTVRARDEKNVNSEMATGEIEVLASSLTIINRAESLPLDSNHVNTEEA
RLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPS
RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
AEQVREVMEALVRSLWQDVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLK
AVEFAVFSGPANDPKGRVAALRVPGGAALSRKQIDDYGNFIKIYGAKGLAYIKVTERAKG
LEGINSPVAKFLNAEIVEAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLT
DETKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAQLKAAPEDAVANAYDMVING
YEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTM
LLTGTDNIRDVIAFPKTTAAACLMTEAPSVANPTALAELGIQVVKKDNKESLENE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacagaatattgcggacagctccgtttgtcccacgtggggcagcaggtgactctg
tgtggttgggtcaaccgtcgtcgtgatcttggtagtctgatcttcatcgacatgcgcgat
cgcgaaggtatcgtgcaggtgtttttcgatccggatcgggcggacgcgttaaagctggcc
tctgaactgcgtaatgagttctgcatccaggtgacgggcaccgtgcgtgcgcgtgacgag
aaaaacgtcaatagcgagatggcaacgggcgaaatcgaagtgctggcctcttcgctgacg
atcatcaaccgggcagaatcactgccgcttgactccaaccacgtgaacaccgaagaagcg
cgtctgaagtaccgctatctggatctgcgtcgcccggaaatggcgcagcgcctgaaaacc
cgcgcgaagatcaccagcctggtgcgccgctttatggacgatcacggtttccttgatatc
gaaaccccgatgctgaccaaagccacgccggaaggtgcgcgtgactatctggttccttcc
cgcgtgcataaaggtaaattctacgcgctgccgcagtctcctcaattgttcaaacaattg
ctgatgatgtccggttttgaccgctactatcagatcgtcaagtgcttccgcgacgaagac
cttcgtgctgaccgtcagccagaatttacccagatcgatgtggaaacctccttcatgacc
gccgaacaggtgcgtgaagtgatggaagcgctggtgcgtagcctgtggcaggacgtgaaa
ggtgtggatctgggcgacttccctgtcatgacttttgctgaagctgaacgtcgttacggt
tccgataaaccggatttgcgtaacccaatggagctggtggacgttgccgacctgctgaag
gccgttgagttcgctgtgttctctggtccggcgaacgatccgaaaggacgcgttgctgcg
ctgcgcgttccgggcggcgctgcactgagccgtaagcagatcgacgactacggtaatttc
attaagatctacggcgcgaaaggtttggcttacattaaagtcaccgagcgtgcgaaaggt
ctggaaggcatcaacagtccggtggcgaaattcctcaatgcggaaatcgtggaagcgatc
cttgagcgcactggcgcgcaagatggcgatatgattttcttcggcgcggacaacaagaaa
gtggttgccgatgcgctgggcgcgttacgtctgaaactgggcaaagacctgagcctgact
gacgaaacgaaatgggcgccgctgtgggttatcgatttcccgatgttcgaagatgacggt
gaaggtggtctgaccgcaatgcaccatccgttcacctcaccgaaagacatgacggctgcg
caactgaaagctgcaccggaagacgcggtggcgaacgcctatgatatggtcatcaacggc
tacgaagtgggtggtggttccgtgcgtattcacagcggtgaaatgcagcagaccgtgttt
ggcattctgggtatcaatgaacaggaacagcgtgagaaatttggcttcctgctggacgcg
ctgaaatacggtacgccgccgcacgctggcctggcattcggccttgaccgtttgaccatg
ctgctgaccggtaccgataatatccgcgatgttattgccttcccgaaaaccaccgccgcg
gcctgcctgatgaccgaagcgccgagcgttgctaacccaacagcgctggctgaactgggt
attcaggtcgttaagaaagacaataaagagtcgttggagaacgaataa
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