Citrobacter farmeri: CI104_16905
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Entry
CI104_16905 CDS
T05012
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfar02000
]
CI104_16905
Transporters [BR:
cfar02000
]
Other transporters
Pores ion channels [TC:
1
]
CI104_16905
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
YfaZ
Motif
Other DBs
NCBI-ProteinID:
AST80637
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Position
3383937..3385922
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AA seq
661 aa
AA seq
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MTIPHVKAIAVVVSAACLPSLVHAADQDTVVVTATGFEQKIQNAPASISVITKQQIEDKA
YRDVTDALKDVPGVVVTGGGSSSDISIRGMASQYTLFLVNGKRISTRGTRPNSDNSGIEQ
GWLPPLESIERIEVIRGPMSSLYGSDAMGGVINVITKKVSNTKGWTGSLHGDATFQENSD
SGDLFQTNAYASGPLIDGLLGAKVTGLLSRRAEDQIVNGYNEQRLRNGGLTLNFTPDDKN
DIDFDIARELQDRDSTPGKSMAAESCRNGTCKPNTKSESRYEHTTYSLTHSGYYDEFNTT
SYIQQEETNNPGREMKSYNTIFNNQNQIFLGAHTLTLGGQYRYEKLRDTGNQLKAADGLD
KLTRWSWALFAEDEWAMTDSFTLTGGIRMDKDENYGDNWTPRGYGVWHLSDQWTLKGGVS
AGYRAPDLRQSSANWGQVTGGGRLNGIIVGNPDLKPEKSLSEELGLLWDNGDNLNAGITL
FNTDFKDKITEVRRCNSSADPACTIGSESYDFISDRVNVDKANMRGVESTFGWKITRDLN
WTANYTFTESEQKSGQFEGKPLNKMPKHMFNTTLDWQATETVGFWSRLNFRGKTSEYLSR
TSMSQGTPSYTQVDVGLRYNANKNLLVTAGVYNALDKQIDYDTYDTILDGRRYTVGLTYN
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaccatacctcacgttaaggctattgctgtcgtagtcagcgcggcatgcctcccatcg
ctcgttcatgctgccgatcaggataccgttgttgttaccgcgacgggatttgagcagaaa
atccagaatgccccggcttcaatttcggttatcacaaagcagcaaattgaagacaaagct
taccgggacgttaccgatgcgctgaaagatgtgcccggcgttgtcgtcaccggcgggggc
agcagcagtgatatcagcatccgcgggatggcgtcgcagtacacactgttcctggtgaac
ggcaaacgcatcagcactcgcggtacgcgtccgaacagcgataactccgggatcgaacag
ggctggctgccgccgctggagtccatcgagcgtattgaggtcatccgcggaccgatgtca
tcgctgtacggatccgatgcgatgggcggcgtgattaacgtgatcaccaaaaaagtctct
aacaccaaaggctggaccggctctctgcacggcgacgccaccttccaggaaaacagcgat
tccggtgatttattccagaccaacgcctatgcttcaggtccactgatcgacggcctgttg
ggtgcaaaagtcaccggattactgtctcgccgcgcggaggaccaaatcgtcaatggctac
aatgagcaacgcctgcgtaatggcggtctgactctcaactttacgccggatgataaaaac
gatatcgattttgatatcgcccgtgaattgcaggatcgcgacagtacgccgggtaaatca
atggctgcagagagctgccgtaacggcacctgtaagccaaacacaaaaagtgaaagccgc
tatgagcacacaacctactcattaacccacagcggctattacgatgagttcaacaccacc
agctatatccagcaggaagagaccaacaacccgggtcgcgaaatgaagtcgtacaacacg
atcttcaataaccagaaccagatcttcctcggcgcccataccctgacgctgggcggtcag
tatcgttatgaaaaactgcgcgataccggcaaccaactgaaagcggcagatggtctggat
aaactgactcgctggagctgggcactgtttgcggaagatgaatgggcgatgaccgacagc
tttactctgaccggcgggatccgcatggataaagacgaaaactacggtgacaactggaca
ccgcgcggttatggcgtctggcatctgagcgatcaatggactttaaaaggcggcgtctcc
gcaggctaccgcgcaccggatctgcgtcagtcctccgcaaactggggtcaggtcacgggt
ggcggtcgcctgaatggcattatcgttggtaacccggatctgaaaccagagaagagcctg
agcgaagaactgggtctgctgtgggataacggcgacaatctcaacgccggcatcaccctg
ttcaataccgatttcaaagataagattaccgaagttcgccgctgtaacagcagcgccgat
ccggcctgtacgattggcagtgaaagctatgattttatcagcgatcgcgtgaacgttgat
aaggccaacatgcgcggtgtggaatcgacgttcggctggaagataacccgcgacctcaac
tggacggccaactacacctttaccgagtcagaacagaaaagcggtcaattcgaaggcaag
ccattaaacaaaatgccaaagcatatgtttaacactacgctggactggcaggcgactgaa
accgtgggcttctggagtcgtctgaacttccgcggtaaaacctctgaatacctgagccgt
acctcaatgtcgcagggcacgccatcctatacccaggttgatgtcggtctgcgttacaac
gcgaacaagaacctgctggtgacggctggggtgtataacgcgctggataaacagattgat
tatgatacctacgacaccatcctcgatggccgtcgctatacggtgggcctgacgtacaac
ttctga
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