Citrobacter farmeri: CI104_16945
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Entry
CI104_16945 CDS
T05012
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00240
Pyrimidine metabolism
cfar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CI104_16945
Enzymes [BR:
cfar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
CI104_16945
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
AST80645
UniProt:
A0A8H9TTQ9
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All DBs
Position
complement(3393118..3394053)
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AA seq
311 aa
AA seq
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MSELTLSSELLHISPEVQDAINSKKPIVALESTIISHGMPFPQNAQTAIEVEETIRKHGA
VPATIAIIGGVMKVGLSKEEIELLGREGHSVTKVSRRDLPFVVAAGKNGATTVASTMIIA
ALAGIHVFATGGIGGVHRGAEHTFDISADLQELAHTNVTVVCAGAKSILDLGLTTEYLET
FGVPLIGYQTTALPAFFCRTSPFEVSIRLDSAKEIARAMAVKWQTGLNGGLVVANPIPET
YAMAEEKINAAIDQAVREAEEQGVVGKESTPFLLARVAELTGGDSLKSNIQLVFNNAVLA
CEIAKEYQRLA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattaacgctttcctctgaattactgcatatttcgccagaagtccaggacgct
attaatagtaaaaaaccgattgttgcgcttgaatcgacgattatttctcacggtatgcct
tttccacaaaatgcgcagacggcaattgaagttgaagaaacaatccgtaaacatggagcc
gtgccggcaacgattgccattattggcggagtcatgaaagtcgggttgagtaaagaagaa
attgaattattaggtcgcgaaggacatagcgtcactaaagtcagtcgtcgtgatttaccg
tttgtagtggctgcaggaaaaaatggcgcgactaccgttgcctcgaccatgattattgcc
gcccttgccggtattcacgtttttgctaccgggggtattggcggtgttcatcgcggtgct
gaacatacatttgatatttccgccgatctacaggaactggcccataccaatgtgaccgtg
gtttgtgccggcgcgaaatctattctcgatttaggtttaaccacggaatatttagaaacg
ttcggtgtgccactcattggctatcagaccaccgcgttaccggcatttttctgccgcacc
agtccgtttgaagtcagtattcgtctcgacagcgcgaaggaaattgcccgtgcgatggcg
gtgaaatggcaaaccggcctgaacggcggtctggtggttgccaatccaatcccggaaacc
tatgccatggcggaagagaaaatcaacgcggcgattgaccaggccgttcgggaagcggaa
gagcagggcgttgtcggcaaagaaagtacgccgttcctgctggcgcgcgttgctgaatta
accggcggcgacagcctgaagtccaacattcaactggtgtttaacaacgccgtactggcc
tgcgagatcgcgaaggaatatcaacgcctcgcctga
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