Citrobacter farmeri: CI104_17225
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Entry
CI104_17225 CDS
T05012
Name
(GenBank) porin OmpC
KO
K09475
outer membrane pore protein C
Organism
cfar
Citrobacter farmeri
Pathway
cfar01501
beta-Lactam resistance
cfar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CI104_17225
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CI104_17225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfar02000
]
CI104_17225
Transporters [BR:
cfar02000
]
Other transporters
Pores ion channels [TC:
1
]
CI104_17225
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
AST80695
LinkDB
All DBs
Position
complement(3449417..3450547)
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AA seq
376 aa
AA seq
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MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLFGKVDGLHYFSDDKSADGDQTYMRIG
FKGETQVNDQITGYGQWEYQIQGNAPESENNSWTRVAFAGLKFGDAGSFDYGRNYGVVYD
VTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNADFFGLVDGLNFALQYQGKNDSPSGE
GADGLAYTGVTNNGREALRQNGDGVGGSVTYDIGEGFGLGAAVSSSKRTDEQNKAAYLGN
GDRAETYTGGLKYDANNVYLAAQYTQTYNATRVGGQGWANKAQNFEVVAQYQFDFGLRPS
VAYLQSKGKNLGTLNGRNYDDEDLLKYVDVGATYYFNKNMSTYVDYKINLLDDNSFTRDA
GISTDDIVALGLVYQF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtactgtccctcctggtaccagcactgctggtagcaggcgcagcaaat
gcggctgaaatttacaacaaagacggcaacaaattagacctgttcggtaaagtcgacggt
ctgcattatttctccgatgacaagagcgctgatggcgatcagacctatatgcgtatcggt
ttcaaaggcgaaacccaggttaacgatcagatcaccggttacggccagtgggagtatcag
atccagggtaacgcgcctgaatccgaaaacaactcctggactcgtgttgcattcgcgggt
ctgaaattcggcgatgcgggttctttcgactacggtcgtaactacggcgtagtttatgac
gtaacctcctggaccgacgtcctgccagaattcggtggcgacacctacggttctgacaac
ttcatgcagcagcgtggtaatggcttcgcgacttaccgtaacgctgatttcttcggtctg
gttgatggcctgaactttgccctgcagtatcagggtaaaaacgacagcccatcaggcgaa
ggtgctgatggcttagcttacaccggcgtaacgaacaacggccgtgaagcactgcgtcag
aacggcgacggtgttggcggttccgtgacttatgacatcggtgaaggcttcggtctgggt
gcggcagtgagcagctccaaacgtactgatgagcagaacaaagcggcttatcttggtaac
ggcgaccgtgctgaaacctacaccggcggcctgaaatacgacgctaacaacgtttatctg
gcagcacagtacacccagacctataacgcaacgcgcgtaggcggccagggttgggcaaac
aaagcgcagaacttcgaagtggttgctcagtaccagttcgacttcggtctgcgtccgtcc
gttgcttacctgcagtccaaaggtaaaaacctggggactctcaacggtcgtaactacgac
gacgaagatctgctgaaatatgttgatgttggcgcaacctactacttcaacaaaaacatg
tccacctacgttgattacaaaatcaacctgctggatgacaacagcttcactcgtgatgcc
ggtatcagcaccgacgacatcgttgcactgggcctggtttaccagttctaa
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