Citrobacter farmeri: CI104_17300
Help
Entry
CI104_17300 CDS
T05012
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfar03032
]
CI104_17300
03400 DNA repair and recombination proteins [BR:
cfar03400
]
CI104_17300
Enzymes [BR:
cfar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CI104_17300
DNA replication proteins [BR:
cfar03032
]
Prokaryotic type
DNA Topoisomerases
CI104_17300
DNA repair and recombination proteins [BR:
cfar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CI104_17300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Peptidase_M13_N
Motif
Other DBs
NCBI-ProteinID:
AST80710
LinkDB
All DBs
Position
complement(3469383..3472019)
Genome browser
AA seq
878 aa
AA seq
DB search
MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLAYIDDEDISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLIARPWDLGNV
AAMLERAGDDAARPEWLEPEFGVRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLHILGSADRLMEVIREELELIRDQFGDERRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGVNVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNDGDELIGVDLTAGKDEVMLFSAAGKVVRFKEDAVRAMGRTATG
VRGIKLAGEDKVVSLIIPRGEGAILTVTQNGYGKRTAAEEYPTKSRATQGVISIKVTERN
GSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVA
EPVDDEDLDAIDGSAAEGDDDIAPEAETDDDVADDADE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggtcaacattgaggaagagctgaagaactct
tatctggattatgcgatgtcggtcattgttggccgtgcgctgccagatgtccgagatggc
ctgaagccggtacaccgtcgcgtactttacgccatgaacgtattgggcaatgactggaac
aaagcctataagaaatcagcccgtgtcgttggcgacgtcatcggtaaataccacccgcac
ggcgactctgcggtatatgacaccattgttcgtatggctcagccgttctcgctgcgatat
atgctggtggatggccaggggaacttcggttccatcgatggtgactctgcggcggcgatg
cgttatacggaaatccgtctggcgaagattgcccatgagttgatggccgatctggaaaaa
gagacggttgattttgtcgacaactatgacggcacggaaaaaatccctgacgttatgccg
accaaaatccctaacctgttagtgaacggctcctccggtatcgcggttgggatggcgact
aacattccgccgcacaacctgacggaagtggtcaacggttgtctggcgtatatcgacgat
gaagacatcagcattgaagggctgatggaatacatcccgggtccggatttcccgacggcg
gcgatcatcaatggtcgtcgcggtattgaagaagcctatcgtaccggtcgcggtaaagtg
tacattcgcgcccgcgcggaagtagaagttgacgcgaaaaccggtcgtgaaaccattatc
gtgcatgaaatcccgtatcaggtgaacaaagcgcgtctgatcgagaaaatcgcggaactg
gttaaagacaaacgcgttgaaggcatcagcgcgctgcgtgatgagtctgacaaagacggc
atgcgcatcgtgattgaagttaaacgcgacgcggtcggggaagtggtactgaacaacctc
tactcccagactcaactgcaggtctctttcggtatcaacatggtggcattgcaccatggt
cagccgaaaatcatgaacctgaaagacatcatttcagcgtttgtgcgccaccgtcgtgaa
gtggtgacccgccgtaccattttcgaactgcgtaaagctcgcgatcgtgcgcatatcctt
gaggcgctggcaattgcgctggcgaatatcgatccgatcattgaactgatccgtcgtgcg
ccgaccccggcagaagcgaaagcggggctgattgcgcgtccatgggatctgggcaacgtg
gcggcgatgctggaacgtgccggtgacgatgccgcgcgtccggagtggctggagcctgaa
ttcggtgtgcgtgatggtcagtactacctgacggaacagcaggcccaggcgattctggat
ctgcgtttgcagaaactgaccggccttgagcacgaaaaactgctcgacgaatacaaagag
ttgctggaacagatcgcggaactgctgcacattctgggcagcgccgatcgcttgatggaa
gtcattcgcgaagagctggaactgatccgcgatcagtttggcgatgagcgccgtaccgaa
atcaccgccaacagcgccgatatcaatatcgaagatctgatcaaccaggaagatgtggtt
gtcaccctgtctcaccagggctacgtgaagtatcagccgctgaccgactacgaagcacaa
cgccgtggtgggaaaggcaagtcggctgcacgtattaaagaagaagactttattgaccgc
ctgctggtggccaacacccatgacacgatcctctgcttctccagccgtggtcgtctgtac
tggatgaaggtctatcagttgccagaagcgagccgtggcgcgcgtggtcgtccgatcgtc
aacctgctgccgctggaagccgatgagcgtattaccgccatcctgccggttcgcgagtac
gaagagggcgtgaacgtctttatggcgaccgccagcggtacggtgaagaaaacggcgctg
accgagttcagccgtccgcgttctgccggtatcatcgcggtaaacctgaacgacggcgac
gaactgattggtgtggatctgaccgcaggtaaagacgaagtcatgctgttctcggctgcc
ggtaaagtggtgcgcttcaaagaggacgccgtccgtgcgatgggtcgtactgcgaccggc
gtacgtggtatcaagctggcgggcgaagacaaagtcgtctccctgattattccgcgcggc
gaaggcgcgatcctgaccgtgacgcaaaacggttacggtaagcgtacagcggcggaagag
tatccgaccaagtctcgtgcgacgcagggcgttatctctatcaaagtgaccgagcgtaac
ggctccgttgttggcgcagtgcaggtcgatgactgtgaccagatcatgatgatcaccgat
gcaggtacgttggtacgtacacgcgtgtcggaaatcagcgtggtagggcgtaacactcag
ggcgtgatcctcatccgtaccgcggaagatgaaaacgtggtgggtctgcaacgtgtggct
gaaccggtggatgacgaagacctcgacgccatcgacggtagtgcggcggaaggggatgat
gatatcgctccagaagcggaaaccgacgacgatgttgctgatgacgctgacgagtaa
DBGET
integrated database retrieval system
