Citrobacter farmeri: CI104_17830
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Entry
CI104_17830 CDS
T05012
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00071
Fatty acid degradation
cfar00280
Valine, leucine and isoleucine degradation
cfar00310
Lysine degradation
cfar00362
Benzoate degradation
cfar00380
Tryptophan metabolism
cfar00410
beta-Alanine metabolism
cfar00640
Propanoate metabolism
cfar00650
Butanoate metabolism
cfar00907
Pinene, camphor and geraniol degradation
cfar00930
Caprolactam degradation
cfar01100
Metabolic pathways
cfar01110
Biosynthesis of secondary metabolites
cfar01120
Microbial metabolism in diverse environments
cfar01200
Carbon metabolism
cfar01212
Fatty acid metabolism
Module
cfar_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CI104_17830 (fadJ)
00650 Butanoate metabolism
CI104_17830 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
CI104_17830 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CI104_17830 (fadJ)
00310 Lysine degradation
CI104_17830 (fadJ)
00380 Tryptophan metabolism
CI104_17830 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CI104_17830 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CI104_17830 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CI104_17830 (fadJ)
00930 Caprolactam degradation
CI104_17830 (fadJ)
Enzymes [BR:
cfar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CI104_17830 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CI104_17830 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CI104_17830 (fadJ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AST80812
UniProt:
A0A8H9NR38
LinkDB
All DBs
Position
complement(3578090..3580249)
Genome browser
AA seq
719 aa
AA seq
DB search
MEMTSAFTLNVRLDNVAVISVDVPGEKMNTLKAEFASQVRAMLKQIRENKAIRGVVIISA
KADNFIAGADINMISRCKSAQEAETLARQGQQLMAEINALPIPVVAAIHGACLGGGLELA
LACHARVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRRVGISIALDMILTGKQLRAKQAL
KAGLVDEVVPQTILLDAAVEWAKKDRPGHRPLPVRERILAGPLGRALLFRMVSKKTEQKT
QGNYPATERILQVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG
SEVPPGPLNSVGVLGGGLMGGGIAYVTACKGGLPVRIKDINPKGINHALKYSWDQLETKV
RRRHIKASERDKQLALISGSVDYRGFCHRDLVIEAVFEDLSLKQQMVAEVEQNCASHTIF
ASNTSSLPIGDIAAKAARPEQVIGLHFFSPVEKMPLVEVIPHATTSGKTIATTVKLAKKQ
GKTPIVVRDKAGFYVNRILAPYINEAIRLLTEGERVDQIDSALVKFGFPVGPIQLLDEVG
IDTGTKIIPILEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGAKGRKSKKQVDPA
IYALIGAQGQSRLSPQQMAERCVMLMLNEAARCFDEQVIRSARDGDIGAVFGIGFPPFLG
GPFRYMDALGAGEVVAVLQRLASLYGPRFTPCDRLLQMAERGESFWKTDATDLNEQGQM
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgacatcggcttttacgcttaacgttcgcctggacaatgtcgccgtcatctct
gttgatgtccccggagaaaagatgaataccctcaaggcggaatttgcctcgcaggtccgg
gccatgctgaaacagatccgcgaaaacaaggcgattcgcggcgtcgtgatcatttccgcg
aaagcggataatttcattgccggggcggatattaatatgattagtcgctgcaaaagcgcg
caggaagcggaaacgctggcgcgacaagggcagcaactgatggctgagatcaacgcgctg
ccgatcccggtggttgccgccattcacggtgcctgtctgggcggtgggcttgaactggcg
ctggcctgtcatgcgcgtgtctgcacagatgatgcaaaaaccgtacttggtttaccggaa
gttcaactcgggctgctgccaggttctggtggcacccaacggctaccacgacgagtggga
atcagtattgcactggatatgattcttaccggtaaacaacttcgcgcgaagcaggcgctg
aaagccgggctggtagatgaggtggttccgcagacgatcctgctggacgctgccgtggaa
tgggcgaaaaaagatcgccctggtcatcgaccccttccggttcgtgaacgtattctggcg
ggtccacttgggcgagcattgttgttccgcatggtcagcaagaaaacagaacagaaaacc
cagggaaattacccggcgacagaacgcattttacaggtgattgagaccggactggcacag
ggtagcagcagcggctatgacgcggaagcgcgcgcgtttggcgagctggcgatgacgccg
cagtcccaggcgttacgcaatatcttttttgccagtacggatgtgaaaaaggaccccggc
agcgaggttccacccggaccgcttaacagcgtcggtgtactcggcggtgggctgatgggc
ggcggtattgcctacgtcacggcctgtaaaggtggcttgccagttcgcatcaaagacatt
aatcccaaaggaatcaatcacgcactgaaatacagctgggaccagcttgaaacgaaggtg
cgtcggcggcatatcaaagccagtgagcgtgacaaacagctggcgctgatttcggggtcg
gtggactatcgcggcttttgccatcgcgatctggttattgaagcggtgtttgaagatctg
tcgttaaaacaacagatggtggcagaagttgagcaaaattgcgcgtctcacaccattttt
gcatccaatacctcatctttacctattggtgatattgcggcaaaagcggccagacccgag
caggtgataggtctacacttctttagcccggttgaaaaaatgccgctggtggaggtgatt
ccgcatgccacgacgtcggggaaaaccattgccaccacggttaagttggcaaaaaaacag
ggtaaaacaccgattgtggtgcgtgataaggccgggttctacgtaaaccgtattcttgcg
ccatatatcaatgaagcgattcgcctgctaaccgaaggcgagcgggtcgaccagattgac
agcgcactggtaaagtttggttttccggtcgggccaatccaacttttggatgaggtcgga
atcgacacaggcactaaaattataccgatactggaagccgcttatggcgagcgttttagc
gcccctgcaaatgttgtttcatcaattttgaatgacgatcgcaaaggtagaaaaaatggt
cggggtttctatctttatggggcgaaagggcgtaaaagcaaaaaacaggtcgaccctgca
atttatgcgcttattggcgcgcaggggcaaagtcggctctccccccaacagatggcggaa
cgctgtgtcatgttaatgctcaatgaggcggcgcgctgctttgatgagcaggtgatccgt
agtgcgcgcgatggtgacatcggcgcggtgtttggtattggttttcctccgtttctcggg
ggcccgttccgttatatggatgctctcggtgcgggtgaagtggttgcggtattgcaacgt
ctggcttcgctgtatggtccgcggtttacgccgtgcgacaggttgttacagatggcggag
cgaggtgaaagtttctggaaaacagatgcaactgacctgaatgaacaaggtcaaatgtaa
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