Citrobacter farmeri: CI104_18540
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Entry
CI104_18540 CDS
T05012
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CI104_18540
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cfar01007
]
CI104_18540
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfar03016
]
CI104_18540
Enzymes [BR:
cfar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
CI104_18540
Amino acid related enzymes [BR:
cfar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CI104_18540
Transfer RNA biogenesis [BR:
cfar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CI104_18540
Prokaryotic type
CI104_18540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
tRNA-synt_2d
Amidohydro_2
Motif
Other DBs
NCBI-ProteinID:
AST80939
UniProt:
A0A8H9TTE5
LinkDB
All DBs
Position
complement(3718645..3719919)
Genome browser
AA seq
424 aa
AA seq
DB search
MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVT
DVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKG
RYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRELGIAGHVNLELNSIGSLDARANYRDA
LVAFLEQHIEKLDEDCKRRMYSNPLRVLDSKNPDVQALLNDAPQLGDYLDDDSREHFAGL
CKLLEAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRAT
PGVGFAMGLERLVLLVQAVNPEFKADSVVDIYLVASGADTQSAAMTLAERVRDEIPGVKL
MTNHGGGNFKKQFARADKWGARVALVLGESEVAAGTVVVKDLRSGEQTEVAQDSVAAHLR
TLMA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaacattcaagccattcgcggcatgaacgattatctgcctggcgaaaccgcc
atctggcagcgcattgaaggcacactcaaaaacgtgctcggcagctacggttacagtgaa
atccgcttgccgattgtagagcagaccccgttattcaaacgcgcgatcggcgaagtgacc
gacgtggttgaaaaagagatgtacacctttgaggaccgcaatggcgatagcctgacgctg
cgtccggaagggacggcgggctgtgtacgcgccggcatcgagcatggtcttctgtacaat
caggaacagcgtctgtggtacatcgggccgatgttccgccacgaacgtccgcagaaaggg
cgctaccgtcagttccatcagttgggcgctgaagtctttggtctgcaaggaccggacatt
gatgccgaactgatcatgctaaccgcgcgctggtggcgtgaactgggtatcgccgggcat
gtcaatctggaactgaactccattggttccctggacgcgcgtgcaaactatcgcgatgcg
ctggtggcgttcctcgaacaacacattgagaaactggacgaagattgtaaacgtcgcatg
tactccaatccgctgcgcgtactggattcaaaaaatccggacgtacaggcgctgctcaac
gatgctcctcagcttggcgactacctggatgacgactcccgcgagcactttgcgggtctg
tgtaaactgctggaagccgcaggcattgcctacaccgttaaccagcgtctggtgcgcggt
ctcgactactacaaccgcaccgtatttgaatgggtcaccaacagcctgggttcacaaggt
acggtctgcgcgggcggccgttatgacgggctggtagagcaactcggcggtcgcgcgacc
ccgggggtaggctttgcaatgggtctggaacgacttgttttactggttcaggcagttaat
ccggaatttaaagccgattctgttgtcgatatatacctggtcgcttcaggcgcggatacg
cagtctgcggcaatgacactggctgagcgcgtacgtgatgaaatccctggcgtgaagcta
atgacaaaccacggtggcggcaactttaagaaacagtttgcccgagctgataaatggggc
gcccgcgttgcactggtgcttggcgagtccgaagtggctgctggtaccgttgtagtgaag
gatttgcgctccggtgagcaaaccgaggtggcacaggacagcgttgccgctcatttgcgc
acgttaatggcttaa
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