Citrobacter farmeri: CI104_18815
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Entry
CI104_18815 CDS
T05012
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CI104_18815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfar03019
]
CI104_18815
03009 Ribosome biogenesis [BR:
cfar03009
]
CI104_18815
03036 Chromosome and associated proteins [BR:
cfar03036
]
CI104_18815
Enzymes [BR:
cfar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CI104_18815
Messenger RNA biogenesis [BR:
cfar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CI104_18815
Ribosome biogenesis [BR:
cfar03009
]
Eukaryotic type
90S particles
RNase
CI104_18815
Prokaryotic type
rRNA processing factors
CI104_18815
Chromosome and associated proteins [BR:
cfar03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CI104_18815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AST80992
UniProt:
A0ACA8DA44
LinkDB
All DBs
Position
complement(3782725..3783405)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFTHQELLQQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSDPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttactcatcag
gagttgttgcagcaggcattaacccaccgcagtgccagcagcaaacataacgagcgttta
gagtttcttggcgactcaattttaagttttgtgattgcgaatgcgctttatcaccgcttc
ccacgtgtggatgagggggatatgagtcgtatgcgcgcgacgctggtgcgtggtaatacg
ctggctgaattagcccgtgagttcgatctgggggaatgtttgcgcttaggcccgggcgaa
ctgaaaagcggcggattccgtcgcgaatcgattctggccgataccgtcgaagcgctgatt
ggcggggttttcctcgacagcgacattcagaccgtcgaaaagctgatcctcaactggtat
cagacgcgtctggacgaaatcagtccgggcgataagcaaaaagatccgaaaacgcgttta
caggaatatttgcagggtcgccatctgccgctgccgtcttatctggtggtgcaggtgcgt
ggtgaagcgcacgatcaggaatttactatccactgccaggttagcggcctgagtgatccg
gtggttggcacaggttcaagccgtcgcaaggcggaacaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga
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