KEGG   Citrobacter farmeri: CI104_18865
Entry
CI104_18865       CDS       T05012                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
cfar  Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:cfar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cfar03009]
    CI104_18865
Enzymes [BR:cfar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CI104_18865
Ribosome biogenesis [BR:cfar03009]
 Prokaryotic type
  rRNA helicases
   CI104_18865
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 DUF561 AAA_22 Shikimate_DH CMS1
Other DBs
NCBI-ProteinID: AST81001
UniProt: A0A8H9NXR0
LinkDB
Position
3792340..3793668
AA seq 442 aa
MTVTTFSELELDESLLDALQEKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKNTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLMQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEEPVEVSATPSTRERKKIHQWYYRADNFEHKFELLK
HLLKQDDATRTIVFVRKRERVHELAEKLRLAGINNCYLEGEMAQIKRNEGINRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
LKIGRYIEEPLKSRVIDELRPTSRAPSEKMTGKPSKKALAKREEKKKEKDKPRVKKRHRD
TKNIGKRRKPSSAATPQESNEE
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctactggatgccctccag
gaaaaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgaa
ggccgtgacgtactcggttctgcgccgacaggcaccggtaaaacggcggcatatctgctg
ccagcgttgcagcacctgctcgactttccgcgtaaaaaatccggtccgccgcgtattttg
atcctgacgccgacacgtgaactggcaatgcaggtcgccgaccatgcccgtgagctggcc
aaaaacacccacctggatatcgcgacaattaccggcggcgtagcgtacatgaaccacgcc
gaagtgttcagcgaaaatcaggatatcgtggtcgccaccaccggccgtctgatgcagtat
attaaagaagagaattttgactgccgcgccgtggaaacgctgatcctcgacgaagctgac
cggatgctggatatgggctttgcccaggacatcgagcacatcgccggggaaacgcgctgg
cgcaaacagactatgctgttctccgccacgctggaaggtgatgcaattaaagattttgcc
gagcgtctgctggaagagccggttgaagtctccgcgacgccatcaacccgcgagcgtaaa
aagattcaccagtggtattaccgtgcggataacttcgaacacaaattcgaactgctgaag
cacctgctgaaacaagacgacgccacccgtaccatcgtgtttgtccgcaagcgcgagcgt
gtgcacgaactggctgagaagcttcgtctggcggggatcaataactgctatctcgaaggt
gagatggcgcagatcaaacgtaatgaaggcattaatcgtcttactgacggtcgcgttaac
gtgctggttgccaccgacgtcgcggcgcgtgggatcgatattccagacgtcagccacgtg
attaacttcgacatgccgcgcagcggagacacctatctgcaccgcattggccgtacgggc
cgcgccggtcgaaaggggacggcaatctcgctggttgaagcgcacgatcacctgctgctg
ctaaaaattggccgctacattgaagaacccctgaaatcacgggtgattgatgagttgcgt
ccaacttcacgtgcaccgagcgaaaagatgacgggtaaaccgtcgaagaaagcgctcgcg
aaacgtgaggagaagaaaaaagagaaagataaaccgcgcgtgaagaaacgccatcgcgat
accaaaaacattggtaaacgtcgcaagccgagttcggcagcaacgccacaggaatcaaac
gaagaataa

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