Citrobacter farmeri: CI104_19130
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Entry
CI104_19130 CDS
T05012
Name
(GenBank) IS1380 family transposase IS1247
Organism
cfar
Citrobacter farmeri
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_1_4
DDE_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
AST81045
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Position
3841249..3842604
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AA seq
451 aa
AA seq
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MDHPEGAGLQRADRVDFDPRVRLEFRGTQLSSDGGLLVMRELDDALGLSDLASAALRDTR
SGKNTVHRLDGLFRQSVFGRLAGYEDVNDANRLACDPVMRQVVGGRAVDAQAASASQMGR
FETETLALAGNRAALADLNGQWIDRFHDRNGLKYIVLDMDSSVSPTHGDQEGSAWNGHFD
CSCYHPNFLFNQFGMLERCALRHGNVHSADGWRDVLDPVIARYAERDLGGRFFRADAAYA
IPAIYERLEEARFFYAIRLPANAVLKDKIAHRLTRPVGRPSLTKVKRFFEEFEYQAASWD
KERRVIAKIEWHPGELFPRVGFIVTNLPMEPDWVVRFYNQRGTAEQHIKEGKYAFRWTRL
SCRKFRDNEVRLQLHALAYNLATFLRCIELPEAMADWSLTSLQLKLIKIGARVVRHARTI
TFQLAEVAVTGTMVRAILAAIRRLRAPPLCA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggatcacccagagggtgcgggcttgcaacgggcagatcgggtggatttcgaccctcgc
gtgcggctggaatttcgcggcacgcagctcagttccgacggcggccttctggtgatgcgc
gagcttgatgacgcgctcgggttgtccgatttggcgtcagcggcgctgcgcgatactcgc
tctggcaagaacacggtccatcggctcgacggcctgttccggcaatcagtctttgggcgg
ctggccggatacgaggatgtcaacgacgccaaccgtctcgcctgcgatccggtcatgcgc
caagttgtcggcggcagagcggtcgatgcacaagcggcctcggcatcgcagatgggacgg
ttcgagaccgagacgctggctctggccgggaaccgtgccgcgctggccgacctgaacggg
caatggatcgaccggttccatgaccgtaacgggctgaagtacatcgttctggacatggac
agctcggtcagcccgacccatggcgaccaggaagggtccgcctggaatggccatttcgac
tgtagctgctatcaccccaactttctgttcaaccagttcgggatgctggaacgctgcgcc
ctgcgccatggcaacgtccacagcgccgatggctggcgtgatgttctcgaccccgtaatt
gcgcgctacgcggagcgcgaccttggtggcaggttcttccgggccgatgctgcctacgcg
atcccggcgatctatgagcgattggaagaagcgcggttcttctacgccatccggctgccc
gcaaacgcggtcctcaaggacaagatcgcgcatcggctaacgcgccctgtcgggcggccg
tcactgaccaaggtcaagcggttcttcgaggaattcgagtatcaggcggcgtcctgggac
aaggaacgccgggtgatcgccaagatcgaatggcatccgggcgaactgttcccgcgtgtc
ggcttcatcgtcaccaacctgccgatggagccggactgggtggtgcggttctacaaccag
cgcggcaccgccgagcagcacatcaaagagggcaaatacgcctttcgctggacgcggctg
tcgtgccggaagttccgcgacaatgaggtgcggctgcaactgcacgccctggcgtacaac
ctggccaccttcttgcgctgcatcgagctgcccgaggccatggccgactggtcgttgacc
agcctgcaactgaagctgatcaagatcggggcacgtgtggtccgtcacgcccgcaccatc
accttccagctggccgaggtcgctgtcaccggcacgatggtacgcgccatcctcgccgct
atccgccgattgcgagcgccaccgctatgcgcatga
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