Citrobacter farmeri: CI104_20230
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Entry
CI104_20230 CDS
T05012
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
cfar
Citrobacter farmeri
Pathway
cfar02020
Two-component system
cfar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CI104_20230
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CI104_20230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cfar02022
]
CI104_20230
Two-component system [BR:
cfar02022
]
OmpR family
QseC-QseB (quorum sensing)
CI104_20230
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Ortholog
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GFIT
Motif
Pfam:
Trans_reg_C
VpsR
Response_reg
Motif
Other DBs
NCBI-ProteinID:
AST81248
UniProt:
A0ACA8DAJ2
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All DBs
Position
complement(4066405..4067052)
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AA seq
215 aa
AA seq
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MRLLLIGENEIKMQFLCSGLNKSGNIIDRVKNISQAEAFLNATHYCAIIILNPTDQCLST
TSQWHNKNSKFALISLIESREANERVKCFNLGLNDCIDFPVDIEELNARIHAAVRRNCAL
APSILRHSNIIYNTSSREVKVNGEEVGLTPRELSLLEVFMMNKERILSRRYLEDKLCSWG
EVIGSNVIEVHISSLRKKLGKGVIKTLSGQGYRLV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
ttgagattattattgattggtgagaatgaaattaaaatgcaatttctgtgctctggactt
aacaagtcagggaatattattgatcgtgtgaaaaatatttcgcaagccgaggcattttta
aatgcaactcactattgtgcaataattattttgaatccaacagatcaatgcttaagtaca
acgtcgcagtggcacaataaaaattcaaaatttgccttaatctcgttaattgagagtagg
gaggcgaatgaaagagtgaagtgttttaatttgggactaaatgattgcattgatttcccc
gttgacatagaagagctcaacgccagaatccatgcggcagttcgccggaattgtgcatta
gccccttcaattttaagacacagcaatatcatctataacaccagttcgcgtgaagtcaaa
gtaaatggcgaagaggtcgggttaacccccagggaattatcccttctggaagtctttatg
atgaacaaagagagaatcctctcccgacgttatcttgaggataagctatgttcatggggc
gaggtgattggcagtaatgtcattgaggtacatatttcgtcgctgagaaaaaaactgggg
aaaggtgttatcaagacgttgtcagggcagggatatcgtttagtttaa
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