Citrobacter farmeri: CI104_20425
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Entry
CI104_20425 CDS
T05012
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00300
Lysine biosynthesis
cfar00470
D-Amino acid metabolism
cfar01100
Metabolic pathways
cfar01110
Biosynthesis of secondary metabolites
cfar01120
Microbial metabolism in diverse environments
cfar01230
Biosynthesis of amino acids
Module
cfar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CI104_20425
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CI104_20425
Enzymes [BR:
cfar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CI104_20425
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AST81282
UniProt:
A0A8H9NVK5
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All DBs
Position
complement(4106355..4107617)
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AA seq
420 aa
AA seq
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MPHSLYCTDTDLTAENLLRLPAEFGCPVWVYDAQIVRRQIAALQQFDVVRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALAAGYDPQTHPDDIVFTADVIDSATLARVSELRIPVN
AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHTDLPQALAVMQR
HQLKLVGIHMHIGSGVDYEHLEQVCGAMVRQVVDFGQDLEAISAGGGLSIPYHDDEEAVD
TRHYFGLWNAAREQIARHLGHYVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDA
GFNDLMRPAMYGSYHHITALAADGRSLENAPRVDTVVAGPLCESGDVFTQQEGGKVETRA
LPAVVPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcctcattccttgtattgtaccgataccgatctcaccgcggaaaacctgctcaggtta
ccggctgaatttggctgtccggtctgggtttacgacgcacagatcgttcgtcgccagatt
gcggcgttacaacagtttgatgtggtgcgcttcgcacagaaggcctgttccaatattcat
attctgcgtttaatgcgcgagcagggcgtcaaagtggactccgtgtcattaggcgaaatc
gaacgtgcgctggcggcgggatacgatccgcaaacgcatccggatgacattgtttttacc
gccgatgtgattgacagcgccaccctggcacgcgtcagcgaattgcgcataccggtcaat
gccggttctgtcgatatgctggatcagcttggacaagtctcgccggggcatcgcgtctgg
ttgcgtgtaaatccgggttttggtcacggtcacagccagaaaaccaataccggtggcgaa
aacagtaaacacggcatctggcatactgatttgccgcaggcgctggcggtgatgcagcgg
catcagttgaaactggtcggtattcacatgcacattggttcaggcgttgactatgaacat
ctggagcaggtgtgtggggcgatggtacgccaggtggtggattttggtcaggatctggaa
gcgatctccgccggtggtggcctgtcgattccttatcatgatgacgaagaggcggtggac
acccggcattattttggcctgtggaatgccgcacgcgaacagatcgctcgccacctggga
cattatgtgaagctggaaattgagccaggacgttttctcgtcgctcagtcaggcgtactg
gtcacccaggtacgcagcgtgaagcagatgggcagtcgccatttcgtgctggtggatgcg
ggatttaatgacctgatgcgtccggcgatgtacggcagttatcaccatattaccgcgctg
gcggcggatggtcgctcgctggaaaatgcgccgcgggtcgacacggttgtcgcaggaccg
ctgtgtgaatctggcgacgtctttacccaacaggaaggcggtaaagtagaaacccgcgcg
ctgccagcggtggtgccgggcgattatctggtgctgcatgataccggcgcgtacggtgcg
tcaatgtcgtcgaattacaacagccgcccgctgttgccggaagtgttatttgacaatggt
caggcgcgactgattcgccgccgccagaccattgaagaactgttagcgctggagttactt
taa
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