Citrobacter farmeri: CI104_20995
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Entry
CI104_20995 CDS
T05012
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CI104_20995 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cfar01007
]
CI104_20995 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfar03016
]
CI104_20995 (lysS)
Enzymes [BR:
cfar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CI104_20995 (lysS)
Amino acid related enzymes [BR:
cfar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CI104_20995 (lysS)
Transfer RNA biogenesis [BR:
cfar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CI104_20995 (lysS)
Prokaryotic type
Other AARSs
CI104_20995 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AST81390
UniProt:
A0A8H9TVE6
LinkDB
All DBs
Position
complement(4231036..4232553)
Genome browser
AA seq
505 aa
AA seq
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MSEQHAQGADAVTDLNNELKTRREKLAGLREQGIAFPNDFRRDHTSDQLHADFDAKENEE
LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGIYNEQFKKWDLGD
ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES
RNTFKVRSQILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDVLGKTEVPYGDEVFDFGKPFEKLTMREAIKKYRPETEMAELDNFDSAKAIAESIGI
KVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaacacgcacagggcgctgacgcggtaaccgatcttaataacgaactgaaa
acgcgccgtgagaagctggctggcctgcgcgagcagggtatcgctttcccgaacgatttc
cgtcgcgatcacacctcagaccaactgcacgctgacttcgatgcgaaagagaacgaagag
ctggaagcgctgaacatcgaagtgtccgttgcaggccgcatgatgacccgtcgtatcatg
ggtaaagcgtcctttgtgacgttgcaggacgtgggcggtcgtattcagctgtacgttgct
cgcgacgaccttccggaaggcatttacaacgagcagttcaaaaaatgggacctcggcgac
atcctcggcgcgaaagggaagctgttcaagaccaaaacgggcgaactgtctatccactgc
accgaattacgtctgctgaccaaagcgttgcgtccgctgccggataaattccacggtctg
caggatcaggaagcgcgctatcgtcagcgctacctggacctcatctctaacgatgagtcc
cgcaacacctttaaagtgcgctctcagatcctggcgggcattcgtcagttcatggttggt
cgcggttttatggaagttgagaccccgatgatgcaggtgatcccaggcggcgcgtctgcg
cgtccgtttatcacccatcacaatgcgctggatctggacatgtacctgcgtattgcgccg
gaactgtacctgaagcgtctggtggttggcggcttcgagcgcgtgttcgaaatcaaccgt
aacttccgtaacgaagggatctccgtgcgtcataaccctgagttcaccatgatggaactc
tacatggcgtatgcggactataaagatctgatcgaactgacggagtcactgttccgtacg
ctggcgcaggacgtgctgggtaaaacggaagtcccttacggcgatgaagtgttcgatttc
ggcaagccgttcgaaaaactgaccatgcgcgaagcgatcaagaaataccgtccggaaacg
gaaatggctgaactggataacttcgactctgccaaagcgatcgctgaatctattggtatt
aaggtcgagaagagctggggtctgggccgtattgtgacggaaatcttcgaagaagtggcc
gaagcgcatctgattcagccgaccttcattaccgagtacccggcagaagtgtctccgttg
gcacgtcgtaatgacgagaacccggaaatcaccgatcgctttgagttcttcattggcggt
cgtgagatcggtaacggctttagcgagctgaacgatgcggaagatcaggcgcagcgcttt
caggatcaggttgacgcgaaagcggcgggcgacgacgaagcgatgttcttcgacgaagat
tacgtcaccgcgctggaacacggtctgccgccgactgcaggtctgggtattggtattgac
cgtatggttatgctgttcactaacagccataccatccgtgacgtcatcctgttcccggcg
atgcgcccggtaaaataa
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