Citrobacter farmeri: CI104_21145
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Entry
CI104_21145 CDS
T05012
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfar03400
]
CI104_21145
DNA repair and recombination proteins [BR:
cfar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CI104_21145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
RecA_N
Rad51
GvpD_P-loop
AAA_22
SLFN-g3_helicase
ABC_tran
AAA_14
nSTAND_NTPase5
AAA_16
nSTAND3
NTPase_1
AAA_24
AAA
cobW
Zeta_toxin
Zn_ribbon_Thio2
DZR
AAA_29
Viral_helicase1
AAA_5
Herpes_Helicase
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AST81416
UniProt:
A0A8H9NUL0
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All DBs
Position
complement(4260586..4261968)
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AA seq
460 aa
AA seq
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MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV
AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
QQMKTLYVTGEESLQQVAMRAHRLGLPTNNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKPPEGMQVFGVKKLADALNVFDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagctccaaaacgcgcctttgtatgtaatgaatgcggggcggattatccgcgc
tggcaggggcaatgtagcgcctgtcatgcctggaacaccatcacggaggtgcgcctggcc
gcgtcgcccacggtggcgcgtaatgagcgactgagtggttatgccgggagcgcgggcgtc
gcaaaagtccagaagctatccgatatcagtctggaagagttgccgcgtttttccaccggt
tttaaagagttcgatcgtgtgctgggcggcggcgtcgttcctggcagcgcgattctgatc
ggcggtaaccccggtgcgggcaaatccacgctgttattgcagacgctgtgcaagcttgca
cagcagatgaaaaccctgtacgtcaccggggaagagtcactacagcaggtggcgatgcgt
gcgcaccgtcttggcctgccgaccaacaatctcaacatgctttcggaaaccagcattgag
cagatctgcctgattgcggaagaagagcagccaaagctgatggtaatcgactccattcag
gtgatgcacatggcggatatccagtcatcacccggtagcgtggcgcaggtgcgtgaaacg
gcagcctacctgactcgctttgccaaaacgcgcggcgtggcgattgtcatggtggggcac
gtcaccaaggacggctcgctggccgggccaaaagtccttgagcactgtatcgactgctcg
gtattgctggatggcgatgccgactcccgttttcgcactctgcgcagccacaaaaaccgt
tttggcgcggtgaatgagttaggtgtcttcgccatgaccgagcagggactgcgcgaagtg
agtaacccttcggcgatcttcctgagtcgtggcgatgaggtcacctccggcagttcggtg
atggtggtctgggaagggacgcggccattgctggtggagatccaggcgctggtcgatcat
tccatgatggcgaacccgcgacgggtggctgtggggctggagcagaaccgtctggcgatt
ctgctggcggtgctgcatcgtcacggtggtctgcaaatggcggatcaggatgtgttcgtc
aacgtggttggcggcgtcaaagtcacagaaaccagtgcggatttggcgctactgctggcg
atggtctccagtctgcgcgacagaccgctgccgcaggatctggtggtgtttggcgaagtg
gggctggcaggagagattcgcccggtgcctagcggccaggaacggatttcggaagcggca
aagcacggctttcgtcgcgcaattgttccggcggccaacgtaccgaaaaaaccgccagaa
gggatgcaggtttttggcgtcaagaagctggcggatgcgctaaacgtatttgacgactta
taa
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