Citrobacter farmeri: CI104_22120
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Entry
CI104_22120 CDS
T05012
Name
(GenBank) HTH-type transcriptional regulator TreR
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfar03000
]
CI104_22120
Transcription factors [BR:
cfar03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CI104_22120
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_31
HTH_3
HTH_IclR
HTH_7
MarR_2
Peripla_BP_4
HTH_Tnp_ISL3
AAA_18
HTH_Crp_2
CENP-B_N
TrmB
MarR
HTH_26
HHH
HTH_28
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AST81595
UniProt:
A0A8H9TV55
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All DBs
Position
4468228..4469175
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPVFYEQGYDPIMMESQFSPEKVEEHLGMLKRRNID
GVVLFGFTGITDVMIAPWQASLVLLARDAKGFASVCYDDDGAIKILMQHLYDQGHRHISF
LGVPHSDVTTGKRRHDAYLAFCKQHKLHPVAALPGLAMKQGYEHAASVMAPDTTALVCAT
DTLALGASKYLQEQRIDNLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAAAQLIEQIN
GRSDLRQIVIPSTLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgacaatcaaagacatcgcccgcttaagcggcgtgggaaaatccacc
gtttcccgtgtgctcaacaacgaaagcggcgtcagtgaacggacccgcgagcgtgtcgaa
gcagtgatgaatcagcacggattttctccctctcgttcggcccgcgccatgcgcggccaa
agcgataaagtggtcgccattattgtgacccgcctcgactcattatcagaaaaccttgcc
gtacagacgatgctgccggtgttttatgagcagggttacgatccgatcatgatggaaagt
cagttttctccggaaaaagtggaagagcacctgggaatgctgaaacgccgcaacatcgac
ggcgtagtgctgtttggttttaccggcatcacagacgtgatgatcgccccgtggcaggca
tcgctggtgctgctggcacgtgatgcgaaaggctttgcttccgtctgctatgacgacgac
ggggcgattaaaatcctgatgcagcacctctacgatcagggacatcgccacatcagtttt
ctcggcgttccgcacagtgacgtcaccaccggaaagcgccgccatgacgcctatctcgcc
ttttgcaagcaacataagctacatcccgtcgctgccctgcctggactggcgatgaagcaa
ggctatgagcatgccgcaagcgtaatggcaccggacactaccgcgctggtttgcgccacg
gatacgctcgcactcggcgccagtaagtatttgcaggaacagcggatcgataacctgcaa
ctggcgagtgtcggtaatacgccgctgatgaaattcctgcatccggagatcgtcacggtc
gatcccggctatgccgaggccggacgccaggccgctgcacagctgatcgagcagatcaac
ggacgcagcgatctgcgccagatcgtcattccttccaccctttcctga
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