Citrobacter farmeri: CI104_22360
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Entry
CI104_22360 CDS
T05012
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00230
Purine metabolism
cfar00240
Pyrimidine metabolism
cfar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CI104_22360 (cpdB)
00240 Pyrimidine metabolism
CI104_22360 (cpdB)
Enzymes [BR:
cfar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
CI104_22360 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
CI104_22360 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
AST81638
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All DBs
Position
4522070..4524013
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AA seq
647 aa
AA seq
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MIKFSATVLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLIN
AARSEAKNSVLVDNGDLIQGSPLGDYMAAKGLKDGDIHPVYKALNTLDYAVGNLGNHEFN
YGLEYLQKALAGAKFPYVNANIIDVKTQKPLFTPYLIKETDVVDQDGRKQKLNIGYIGFV
PPQIMTWDKANLSGKVTVNDITATARQYVPEMREKGADVVVVIAHSGLSADPYQSMAENS
VYYLSDVPGVDAIMFGHAHAVFPGKDFASIKGADIAKGTLNGVPAVMPGMWGDHLGVVDL
VLNNDSGKWQVTQAKAEARPIYDAAAKKSLAGEDSKLVDILKADHDATREFVSKPIGKSA
DNMYSYLALVQDDPTVQVVNNAQKAYVEHFIQGDPDLAKLPVLSAAAPFKVGGRKNDPAS
FVEVEKGQLTFRNAADLYLYPNTLVVVKASGKEVKEWLECSAGQFNQIDSTSSKPQSLIN
WDGFRTYNFDVIDGVEYQIDVSQPARYDGECQTVNPAAERIKNLTFNGKPIDPNATFLVA
TNNYRAYGGKFAGTGDTHIAFASPDENRSVLAAWIGAESKRAGEIHPAADNNWRLAPIHS
ETKLDIRFETSPSDKAAAFIKEKGQYPMQHVTTDDIGFAIYQLDLSK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtttagtgcaacggttttggccacgctgatcgcggccagcgtgaatgccgcg
accgtcgatctgcggataatggaaaccactgatttacatagcaacatgatggatttcgat
tattacaaagataccgcaaccgaaaaattcggactggtacgtaccgcaagcctgattaac
gccgcgcgcagtgaagcgaaaaatagcgtgctggtcgataacggcgatctgattcagggc
agcccgctgggcgactatatggcggccaaagggttgaaggacggtgatatccatccggtc
tacaaggcgctaaatacgctggattatgctgtgggtaatctcggtaaccatgagtttaat
tacgggctggagtatctgcaaaaggcgctggctggcgcgaagttcccctacgttaacgcc
aatattatcgatgttaagacgcaaaagccgttgtttactccctatcttattaaagagact
gacgtcgtcgatcaggatggccgcaaacagaagctgaacattggctatatcgggtttgtc
cctccgcagatcatgacctgggataaagcgaacctgagcggtaaagtgacggttaacgac
attaccgccaccgcgcgccagtatgtcccggaaatgcgcgaaaaaggcgccgatgtggtg
gtggtgattgcgcactcagggctctcagcagacccctaccagagcatggctgagaactcc
gtttattatctcagtgacgtgcccggcgtggacgcgatcatgtttggtcatgcccacgcg
gtcttccccggtaaagactttgccagcatcaaaggtgccgatatcgcgaaagggacgctg
aacggtgtaccggcggtgatgcctggcatgtggggagaccatctgggcgtggtggatttg
gtgctcaataatgacagcggcaaatggcaggtgacgcaggccaaagccgaagcgcggcca
atttacgacgcggctgcgaaaaaatcactggctggcgaagacagcaaactggtggatatt
ctgaaagccgaccacgacgcgacccgtgaatttgtcagtaagccgatcggcaaatccgcc
gataatatgtacagctatctggcgctggtgcaggacgatccgaccgttcaggtagtcaat
aacgcgcagaaagcctatgtcgaacacttcattcagggcgacccggacctggcgaaacta
ccggtgctttccgctgctgcgccgtttaaagtcggcgggcgcaagaacgatccggccagt
tttgtcgaggtcgagaaaggccagctaaccttccggaatgccgccgatctctatctgtac
ccgaacacgctggtggttgtaaaggccagcggcaaagaggtgaaagagtggcttgagtgc
tcagccggacagtttaatcaaatagacagcaccagcagcaagccgcagtcactcattaac
tgggatggtttccgcacctataactttgatgtcattgatggtgtggaataccagattgat
gtctcgcagcccgcacgttatgacggcgaatgccagacggtaaatccggcagcggaaagg
attaaaaatctgaccttcaacggcaagcctattgatcctaacgccaccttcctggtcgcc
accaataactatcgcgcctatggcggtaagtttgccggaaccggtgacactcatattgcc
tttgcgtcaccggacgagaaccgctcggtgctggcggcatggattggcgcggaatctaaa
cgtgccggggaaattcatccggctgccgataacaactggcgtctggcaccgattcacagc
gagacgaagctggatatccgcttcgaaacgtcaccgagtgataaagccgccgcgtttatt
aaagaaaaaggtcaataccccatgcagcacgtcaccaccgatgatatcggttttgcgatt
tatcagttggatttaagcaagtaa
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