Citrobacter farmeri: CI104_22600
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Entry
CI104_22600 CDS
T05012
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfar02000
]
CI104_22600
Transporters [BR:
cfar02000
]
Other transporters
Pores ion channels [TC:
1
]
CI104_22600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AST81682
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All DBs
Position
4566104..4569430
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AA seq
1108 aa
AA seq
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MRLIITFLMAWCLSLGAYAATAPDAKQITQELEQAKSAKPAQPDVVEALQSALNALDERK
GSLERTQQYQQVIDNFPKMSASLRAQLTNLRDEPRSVSPGMTTDALNQEILQVSSQLLEK
SRQAQQEQERAREIADSLSQLPQQQTDARRQLNEIERRIGSATGNTPLNQAQNFSMQAES
ARLKAQVDELELAQLSANNRQELARLRSELAEKQSQQLDAYLQALRNQLNSQRQREAERA
LESTELLAENSADLPPDIVAQFKVNRELSAALNQQAQRMDLVASQQRQATSQTQQVRQAL
TTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVQRLRYEDQLNKQPQL
RQLHQADGQPLTAEQNRILEAQLRTQRELLNSLLQGGDTLILELTKLKVSNSQLEDALKE
VNEATHRYLFWTSDVRPMSFSWPIDIVQDLRRLISLDTFSQLGQASVMMLTSRDTLLPLF
GALILVGFSIYSRRHFTRFLERSAARVGKVTQDHFWLTLRTVFWSILVASPLPVLWMTLG
YGLREAWPYPLAVAIGDGVTATVPLLWVVMICAAFARPNGLFIAHFGWPRERVSRAMRYY
LMSIGLIVPLIMALIMFDNLNDREFSGSLGRLCFILICGALALVTLSLKKAGIPLYLDKE
GSGDNIVNSMLWNLMIGAPVVAILAAAVGYLATSQALLARLETSVAIWFLLLVIYHVIRR
WMLIQRRRLAFDRAKHRRAEMLAQRARGEEEPAHSTSLEGTIDVDESEVDLDAISAQSLR
LVRSILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILV
FIITTQLVRNLPALLELALLQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWAKL
QWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTIS
DWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPSDVNSEEVTQILLTAAHRCSLV
IDNPAPEVFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFREHGIDMPFPPFQ
MRLESLNGRPTGKTLSSAGRRSRPAGSL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgattataacgtttctgatggcctggtgcctcagcctgggggcgtatgctgca
accgcccccgacgccaaacaaatcacccaggaactggagcaggcaaaatccgcaaagcct
gcccagcccgatgtcgtcgaagcccttcagtctgcgttgaacgcgcttgatgaacgtaaa
ggttcactcgagcgcactcagcaatatcagcaggttatcgataatttcccgaaaatgtcc
gccagcctgcgcgcgcagttaaccaacctgcgcgatgaaccccgcagcgtttcgccaggc
atgacgaccgatgcgctgaatcaggaaattcttcaggttagcagtcaattgctggaaaaa
agccgtcaggcccagcaggagcaagagcgcgcccgtgagattgccgactcgctgagccag
cttcctcagcagcaaaccgacgcccgccggcagctcaacgaaatcgaacgccgcattggc
agcgccaccggaaacaccccgctcaatcaggcgcaaaatttcagcatgcaggcagaatcc
gcccgcctgaaagcgcaggttgatgaactggagctggcgcagctttcggccaacaatcgt
caggaactggcgcgtctgcgctccgaactggcggaaaaacagagccagcaactggatgcg
tatttacaggccctgcgcaatcagctcaacagccagcgccagcgtgaagccgagcgggca
ctggaaagcaccgagctcctggctgagaacagcgccgatttaccgccggatattgttgcc
cagtttaaagtgaaccgggaactgtcagccgcgctgaatcaacaggcgcagcgcatggat
ctcgttgcctctcagcaacgtcaggccaccagccagactcaacaggtacgtcaggcatta
acgacactgcgtgaacagtcgcagtggttaggctcgtcaaacctgttgggcgaagcatta
cgtgctcaggtcgcgcgtctgccggaaatgcccaaaccccagcagttggatactgaaatg
gcgcaactgcgcgtccagcgtctgcgctatgaagatcagctcaacaaacagcctcagttg
cgtcagctccatcaggcggacgggcaaccactcactgcggaacaaaaccgtattcttgag
gcgcagctgcgcacccaacgggaactgctgaattcgctgttacagggtggcgatacgctg
atcctcgagctgaccaaactgaaagtgtccaatagccagcttgaagatgcgctgaaagag
gtgaatgaagcaactcaccgctatctgttctggacctctgacgttcgcccgatgtctttc
tcctggccgatagatatcgttcaggatctccgtcgtttgatctcactcgacaccttcagc
cagttaggccaggctagcgtgatgatgctgaccagcagggataccttgttgcctctgttt
ggcgcgttgattctggtcggttttagcatttactcacgtcgccacttcacccgttttctg
gaacgttctgccgccagagtgggcaaagtgacgcaggaccacttctggctcacgctgcgt
accgtgttctggtcgatactggtggcctcgccgctgccggtactctggatgacgctggga
tatggattgcgcgaggcctggccttatcctcttgccgttgcgataggcgatggcgtcacg
gcgacggtgccgctgctgtgggtggtgatgatttgcgcggcgtttgcccggccaaatggc
ctgtttatcgctcacttcggctggccgcgcgaacgcgtgtcgcgtgcgatgcgttattac
ctgatgagtattgggctgattgtgccgctgatcatggcgctcattatgttcgataacctg
aacgatcgggagttctccggctcgctcggccgcctgtgctttattctgatttgcggcgcg
ctggcgctggtcactctgagcctgaaaaaggccggtataccgctctatctcgataaagag
ggcagcggcgacaacattgttaacagcatgctgtggaacctgatgatcggcgcgccggtg
gtggcaatactggcggctgccgtaggttatctggcgacgtcgcaggccctgctggcgcgc
ctggaaacctccgtcgccatctggttcctgctgctggtgatttaccacgtcattcgccgc
tggatgctcattcagcgccgcagactggcctttgaccgcgccaagcaccgccgcgcggaa
atgctggctcagcgtgctcgtggcgaagaagaaccggcccattcaaccagcctcgaaggg
accatcgacgttgacgagagcgaagtcgaccttgacgccatcagcgcccagtcgctccgt
ctggtacgctccatcctgatgctcatcgccctgctgtcggttattgtgctgtggtcggaa
attcattccgccttcggcttcctcgagaacatctcgctgtgggacgttacctccacggta
cagggggtcgaaagtttagaacccattacgctgggtgcggtgctgattgccattctggtg
tttatcatcaccacccaactggtgcgtaatctgcctgcgcttctcgaactggcgttgctg
caacacctcgacctcacgccgggtacgggctacgccattaccaccatcaccaagtacctg
ctgatgctgattggtggtctggtgggcttctcaatgattgggattgagtgggcaaaactg
caatggctggtggcggcactcggtgtgggccttggctttggcttgcaggaaatcttcgcc
aactttatctccggcctgatcatcctgtttgaaaaaccgattcgtattggcgatacggtg
actattcgcgatctgaccggcagcgtaacgaagatcaatacccgcgcgaccacgatcagc
gactgggatcgcaaagagatcatcgtaccgaacaaagcgtttatcaccgagcagttcatc
aactggtcgctgtccgattccgtgacgcgcgtggtgctgaccattccggcgccgtccgat
gtgaacagtgaggaggtgacgcagatcctgctcaccgccgcgcaccgctgctcactggtg
atcgacaacccggcaccggaagtcttcctggtggatctgcaacaggggatccagatcttt
gaactgcgtatctacgccgccgaaatgggtcaccgtatgccgctgcgccacgaaatccac
cagctgattctggcgggcttccgcgagcacggtatcgatatgccgttcccaccgttccag
atgcgtcttgaaagcctcaacggcagaccgacagggaaaacgctcagttctgccggcaga
agaagtcgcccggcggggagtttgtaa
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