Citrobacter farmeri: CI104_24265
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Entry
CI104_24265 CDS
T05012
Name
(GenBank) HTH-type transcriptional activator RhaS
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfar03000
]
CI104_24265
Transcription factors [BR:
cfar03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CI104_24265
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GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AST81973
UniProt:
A0A8H9NY57
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Position
complement(4918292..4919128)
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AA seq
278 aa
AA seq
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MTVLHSVDFFPSGKAPVAIEPRLPQSAFPEHHHDFHEIVIVEHGTGIHVFNGQPYTISGG
TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDAFRFLAGLDQLLPQEQDGVYPSHWRVNQSA
LQQVRQLVAKMEQDGDESDLPGVANREILFMQLLVLLRKSSLMEGAENNDARLNHLMAWL
EDHFAEEVCWEVLADRFSLSLRTLHRQLKQQTGLTPQRYLNRLRLIKARHLLRHSDESVT
EIAYRCGFGDSNHFSTLFRREFDWSPRDIRQGRDALLQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtactgcacagcgtggatttttttccatcaggtaaagcgcccgtggccattgag
ccccggctacctcagtccgcttttccagaacatcatcatgattttcatgagattgtgatt
gtggaacatggcaccggtattcatgtattcaatggacagccctataccatcagcggtggt
acggtctgctttgttcgcgaccatgatcggcacttgtatgaacatacggacaatctttgc
ctgaccaatgtgctctaccgctcgcccgatgcattccgcttcctggccgggttggatcaa
ttgctgccgcaggaacaggatggcgtgtacccctcccactggcgggtgaatcagagtgcg
ctgcaacaggtacgtcaactggtggcaaaaatggaacaggatggcgatgagagcgatctc
cccggcgtggccaatcgtgaaattctgttcatgcagttgctggtgctgttacgcaaaagc
agcctgatggaaggggcggaaaataacgatgcgcgcctgaatcatctgatggcctggctg
gaagatcattttgccgaggaagtatgctgggaggtgctggccgatcggttctcgctgtcc
ctgcggacattgcaccgccagttgaaacaacagaccgggttaacgccgcagcgctatctt
aatcgtctgcgtttaatcaaggcccgccatctgttacgccatagcgatgaaagcgtcacg
gagatcgcttatcgctgcggtttcggcgacagtaaccacttttcgactctgtttcgccgt
gaatttgactggtcgcctcgcgatatccgccagggacgggatgcgttacttcagtaa
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