Citrobacter farmeri: CI104_24570
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Entry
CI104_24570 CDS
T05012
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar03030
DNA replication
cfar03410
Base excision repair
cfar03420
Nucleotide excision repair
cfar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CI104_24570
03410 Base excision repair
CI104_24570
03420 Nucleotide excision repair
CI104_24570
03440 Homologous recombination
CI104_24570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfar03032
]
CI104_24570
03400 DNA repair and recombination proteins [BR:
cfar03400
]
CI104_24570
Enzymes [BR:
cfar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CI104_24570
DNA replication proteins [BR:
cfar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CI104_24570
DNA repair and recombination proteins [BR:
cfar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CI104_24570
NER (nucleotide excision repair)
GGR (global genome repair) factors
CI104_24570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
HHH_2
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
AST82030
UniProt:
A0A8H9TXF5
LinkDB
All DBs
Position
complement(4979725..4982511)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKMGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGSLDTLYAESDKIAGLTFRGAKTMAGKLEQNK
EVAYLSYKLATIKTDVELELTCEQLEVQQPQADELVGLFKKYEFKRWTADVEAGKWLQAK
GAKPAAKPQETIVVDETVEEAAAVLSYDNYVTILDESTLETWIAKLKKAPVFAFDTETDS
LDNISANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRDRALAMLKPLLEDENARKVGQN
LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRV
ERNGVKIDPAVLHKHSEEITLRLAELEQKAHDIAGEVFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIPPKDYLIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLALETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNGARRAGAE
RAAINAPMQGTAADIIKRAMIAVDGWLETEKPRVRMIMQVHDELVFEVHKDDLDAAAKKI
HQLMENCTRIDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccacttatccttgtagatggctcttcttatctctatcgc
gcataccatgcgtttccgccgctgaccaatagcgcaggtgaaccgacaggcgcgatgtac
ggtgtcctcaatatgctgcgcagtctgatcctccagtatcagccaacacatgccgcagtg
gtatttgatgccaagggtaaaactttccgtgacgaattattcgagcattacaaatcacat
cgcccaccaatgccggacgatctgcgggcgcagatcgaaccgctgcatgcgatggtgaaa
gcgatggggctgccgcttctggccgtatccggtgtggaagcggacgatgtaatcggcacc
ctggcgcgtgaagcagaaaaaatgggacggccggtgctgattagtaccggtgataaagat
atggcccagttggtcactccaaacatcacactcatcaataccatgaccaataccattctt
ggtccggatgaggtagtgacaaaatatggcgtgccacccgaactgatcatcgactttctg
gcgctaatgggcgattcctccgataacattcccggtgtgccaggcgttggggaaaagacc
gctcaggcactgttacagggactggggagtctggatacgctttacgctgagtcagataaa
attgccgggttgacgttccgtggtgcgaaaaccatggcgggcaaacttgagcaaaataaa
gaggttgcctatctctcctataaactggcgacgatcaaaacagacgttgagctggaactg
acctgcgaacagttggaagtgcaacagccacaggctgacgaactggtcgggctgtttaaa
aagtatgagttcaaacgctggaccgctgatgttgaagctggcaagtggctacaggcgaaa
ggggcgaaaccggcagcaaaaccgcaggagacgatcgttgttgatgaaaccgtggaagaa
gccgcagccgtgctttcctacgataactacgtgaccattctcgatgaatcgacgctggaa
acgtggattgcgaagctgaaaaaagcgccggtgtttgccttcgataccgaaaccgacagt
ctggataacatctcagccaatctggtagggctttcattcgccattgaaccgggcgtagcg
gcttatgtacccgtggcgcatgactatctggatgcaccggatcaaatctcccgtgaccgc
gcgctggcgatgctcaaaccgctgctggaagatgaaaacgcgcgtaaggtcggacaaaac
ctgaagtacgatcgcggcattctggcgaattatggcattgaattgcggggtattgctttt
gataccatgctcgaatcgtacattctgaatagtgttgccggacgccacgatatggacagc
ctgtccgatcgctggctgaagcacaaaaccatcaccttcgaagaaattgcgggtaaaggg
aagaaccaactgacctttaatcagattgcgctggaagaggccgggcgttacgcggcagaa
gatgccgatgttaccttgcaactgcatttgaaaatgtggccagaattgcagcagcacaaa
ggaccgttgaatgtctttgaaaacatcgaaatgccgctggttccggtgttatctcgtgta
gagcgtaacggtgtgaagatcgaccctgcggtactgcataagcactccgaggagatcacc
ctgcgtctggcggagctggaacagaaggctcatgatatcgcaggagaagtgtttaacctc
tcttcaaccaagcagttgcagacgatcctgttcgaaaagcagggcattaagccactgaag
aaaacgccgggcggcgcgccatcgacgtctgaagaggtgctggaagagttggcgctggat
tacccattacctaaagtgattcttgagtatcgtggcctggcgaagctgaaatcgacctac
actgataaactgccgctgatgattaacccgaaaaccgggcgtgtgcatacgtcatatcat
caggccgtgaccgcgacgggccgcctgtcatcaaccgacccaaacctgcaaaacataccg
gtacgtaacgaggaaggacgtcgtatccgtcaggcatttatcccgccgaaggattacctg
attgtttctgcggactattcgcagattgagctgcgaattatggcgcacttgtcacgcgac
aaaggcctgctgacggcgtttgccgaagggaaagatattcaccgcgccaccgccgcagaa
gtatttggtctggcgctggagaccgtgaccagtgagcagcgtcgcagcgcgaaggcgatc
aactttggcctgatctacggcatgagcgcattcggactggcgcgccagttaaacattccg
cgcaaagaagcgcagaagtatatggacctctatttcgaacgctatccgggcgttctggag
tatatggaacgtacgcgtgcgcaggcgaaagagcagggttatgttgaaacactggaaggc
cgccgcctctatcttccggatatcaaatccagcaacggcgcgcgtcgtgccggcgctgag
cgtgcggcgattaacgccccaatgcagggaactgcagccgatatcatcaagcgggcgatg
atcgcggtcgatggctggctggaaacggaaaaaccacgcgtgcgtatgattatgcaggtg
cacgatgaactggtgtttgaagtacacaaagacgacctggacgcggcagcgaaaaagatc
catcagttgatggaaaactgcacgcgcattgatgtgccgctgttagtggaagtcgggagt
ggtgagaactgggatcaggcgcactaa
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