Citrobacter farmeri: CI104_25595
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Entry
CI104_25595 CDS
T05012
Name
(GenBank) IS21 family transposase
Organism
cfar
Citrobacter farmeri
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Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve_3
rve
TnsD
HTH_23
Sigma70_r4_2
HTH_11
HTH_24
HTH_29
NUMOD1
HTH_7
HTH_3
HTH_IclR
HTH_30
HTH_10
HTH_28
HTH_36
HTH_19
Terminase_5
HTH_12
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AST82713
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Position
pAUSMDU8141-1:complement(65584..67092)
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AA seq
502 aa
AA seq
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MIHKIKSLHDDGKGLSIRAISRELGISRNSVRKYLRQDETTTARKLDNPVRSKQLDTYRG
YLISLLASFPGLSAVKIARKLKEKLGELPTSERSIRRYVSALKEEVATGQHRYYEPVVDE
VPGVQCQVDPGELRNVLIGGVETVVHFVVFVLAYSRLMYVGLSFKPLDTRQFIQLHDEAL
RYFGGMPEELVYDQTKLVVIEEKYRELTLNERFHQYATTAGFRIHACEGYDPESKGKVEA
GVKYVKQDCFYGETFRDEQHLREHVHHWLDKVANVRAHGTTGEAPQLRFERDEQALLKPY
LSPSCVTSEARETRKADKTGLISWKANKYSVPMAWQQSRVGVLEDDSQLHVIDLQTGEVI
AQHALAGGKGQIIKNTHHYRDHAQRRQQLEQDIQVLVGDEALSLALCDQLRRSLPKVYKD
QLFAVRNLLSKHAPVERDMLLNLSQKPGLTARQIEAYLVATQLASRRERLPEPVPEAPSE
LDLSAYRQLGRSTGQEVTHGHA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgatacacaaaataaaatcattacatgacgatggcaaaggactttccattcgggccatc
agccgggagctgggcatctcgcgcaacagcgtgcgcaagtatctgcgtcaggatgaaaca
accactgcccgcaagctggataaccctgtccgcagcaaacagctcgacacctaccgggga
tacctgatcagcttgctggccagctttcccgggctcagtgcagtcaagattgcccgcaag
ctcaaggagaaactgggtgagctgccgacctccgagcgcagtattcgtcgttacgtcagc
gcgctgaaggaagaggttgcaaccggtcagcaccgatattacgagccggtggttgatgag
gtgccgggtgtgcagtgccaggttgacccgggcgagctgcgtaacgtgctgattggtggc
gtggaaacagtggtgcactttgttgtgtttgtgctggcgtactcgcggctgatgtatgtg
ggcctgtcgtttaagccgctggatacccggcagttcatccagctgcatgacgaagcgctg
cgctactttggcggcatgcctgaagagctggtgtacgaccagaccaagctggtggtgatt
gaggagaaataccgggagctgaccctcaacgagcgttttcatcagtacgccaccacagcc
ggctttcgtatccatgcttgcgaaggctatgaccccgagagcaagggcaaggttgaagcg
ggcgtcaaatacgtcaagcaggactgcttttacggcgagaccttccgtgatgagcagcac
ctgcgcgagcatgtgcatcactggctggacaaggtcgccaatgtgcgggcacacggcacc
acaggtgaggcacctcagctgcgttttgaacgtgacgaacaggctctgctcaagccctac
ctgtcaccctcttgcgtcacatctgaagcccgtgagacccgcaaggcggataagaccgga
ctgatctcctggaaggccaacaagtactctgtgcccatggcctggcagcaaagccgtgtc
ggtgtgctggaagacgacagccagctgcatgtgattgatctacaaactggcgaagtgatt
gcccagcatgcgttggcgggcggcaaaggtcagattatcaaaaacacccaccactaccgt
gaccatgcccagcgccggcagcagctggagcaggacattcaagtactggtgggcgacgag
gcactcagcctggccttgtgtgatcagttgcggagatccttgcccaaggtctataaggat
caactgttcgcagtacgcaacctgctgagtaagcacgcacctgttgaacgggacatgctg
ttgaacctgagccagaagccgggcctgaccgcccgacagatcgaagcgtatctggtggcc
acccagctggccagccggcgtgagcgtctgcctgagcccgtgccagaggctccgtcagag
ctggacttgagtgcataccgacagcttggccgctcgactggccaggaggtgacccatggg
catgcttga
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