Coprobacter fastidiosus: Cfast33896_00440
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Entry
Cfast33896_00440 CDS
T09127
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cfas
Coprobacter fastidiosus
Pathway
cfas00061
Fatty acid biosynthesis
cfas00071
Fatty acid degradation
cfas01100
Metabolic pathways
cfas01212
Fatty acid metabolism
cfas02024
Quorum sensing
cfas04146
Peroxisome
Module
cfas_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Cfast33896_00440
00071 Fatty acid degradation
Cfast33896_00440
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Cfast33896_00440
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cfast33896_00440
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cfas01004
]
Cfast33896_00440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfas04147
]
Cfast33896_00440
Enzymes [BR:
cfas01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Cfast33896_00440
Lipid biosynthesis proteins [BR:
cfas01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Cfast33896_00440
Exosome [BR:
cfas04147
]
Exosomal proteins
Exosomal proteins of breast milk
Cfast33896_00440
Exosomal proteins of breast cancer cells
Cfast33896_00440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BEG61089
LinkDB
All DBs
Position
complement(53120..54766)
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AA seq
548 aa
AA seq
DB search
MQQSFNAYIENSIREHWELVALSDFKGVSYQYKDIARKIEKLHILIEAAGIQKGDKIAIC
GRNSSHWAVAFFATLAYGAVAVPILHEFKADNVHHIVNHSDAKLLFVGDVVWENLNESQM
PNLNAIILINDFSVLISKKKSLTDAREHLNEYFGKKFPNRFTKDDVKYYEDQPDELALIN
YTSGSTGFSKGVMLSYRSIWSNLKFCLENLDFLREGDGTVSMLPMAHMYGLAVELMHPFA
KGCHIHFLTRIPSPKIIMDAFAEVKPKLIVAVPLIIEKIIKTKVFPLLDKPLMKLMLMIP
VLDTQLLSKIKMKLEETFGGNLHELIIGGAALNKEVEQFLKKINFPFTVGYGMTECGPLI
SYAPWKQSRATSCGKIVDRMQARIDSSDPENIVGELHVKGDNVMLGYYKNNEATENAFKD
GWLNTGDLAVMDKDNFIYLKGRSKNMILGPSGQNIYPEEIEGKLNNMPFVSESIVIEKEG
KLIALVYPDFENAGKENITQKNIETQMEENRIALNKELPAYSQISQINIHYEEFEKTPKR
SIKRYLYQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaagttttaatgcgtatatagaaaacagcattcgtgaacactgggaactggtc
gctttatcggactttaaaggtgtttcataccaatataaagatattgcccgcaaaatagaa
aagctacacattttgattgaagccgcaggaatacaaaaaggcgataaaatcgcaatatgt
ggacgaaactcgtcgcattgggcagtcgcttttttcgccacattggcatacggtgcagta
gccgtacccatacttcatgagttcaaagcagataacgttcaccatattgtcaatcattct
gacgctaaacttttgtttgttggagacgtagtatgggaaaacttgaacgagtcgcaaatg
cctaacctcaatgcgatcattttgatcaacgatttttccgtacttatatctaaaaagaaa
agcctgacagatgcacgggaacatctgaacgaatatttcggaaagaaatttccgaatcga
tttacaaaagacgatgtaaaatattatgaagaccaacctgacgagttggctctcataaat
tatacttccggttctacaggtttttcaaaaggtgtaatgctctcttatcgcagcatttgg
tcgaacttgaaattttgtttggagaatctcgattttttgcgtgaaggtgacgggacagta
tcgatgcttccgatggcacatatgtacggtctggccgtagaattgatgcatccttttgca
aaaggttgccatattcattttttgacccgcattccctcgcctaaaataattatggatgct
tttgccgaagtaaaaccaaaactaatcgtagcggtacctctaattattgaaaaaatcatt
aaaaccaaagtattcccgttgctggacaaacctttgatgaaacttatgttgatgatcccc
gttcttgatactcaacttctttcaaaaattaaaatgaagctcgaagaaacgttcggaggg
aatttgcatgaattaattatcggcggtgccgcactgaataaagaagtggaacaatttctg
aaaaaaatcaattttccgttcacggtaggatatggaatgacagaatgcggaccattgatt
tcatacgcgccttggaaacaaagcagagccacatcttgcggtaaaatagtagatcgtatg
caagcccgaatcgactcatccgatccggaaaatatcgtaggagaactgcatgtcaaagga
gacaatgttatgctcgggtattataaaaataatgaagctacagaaaatgctttcaaagac
ggatggttgaatacgggagatctcgccgttatggacaaggataatttcatctatctcaaa
ggccgaagcaaaaatatgattttaggaccgtcgggacaaaatatatatcctgaagagatc
gaagggaaattgaacaatatgccctttgtcagcgaatccattgtcattgaaaaagaaggg
aaacttatcgctttggtttatcctgatttcgaaaatgccggaaaagaaaatataactcag
aaaaatatcgaaactcaaatggaggagaatcgaatcgctttgaataaagagcttccggca
tacagccagataagtcaaatcaacatccattatgaagagtttgaaaaaacaccgaaacgc
agtatcaaaaggtatttataccaataa
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