Coprobacter fastidiosus: Cfast33896_02650
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Entry
Cfast33896_02650 CDS
T09127
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfas
Coprobacter fastidiosus
Pathway
cfas03420
Nucleotide excision repair
cfas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cfast33896_02650
03430 Mismatch repair
Cfast33896_02650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfas03400
]
Cfast33896_02650
Enzymes [BR:
cfas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cfast33896_02650
DNA repair and recombination proteins [BR:
cfas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cfast33896_02650
MMR (mismatch excision repair)
Other MMR factors
Cfast33896_02650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Orn_DAP_Arg_deC
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
ResIII
Orn_Arg_deC_N
Motif
Other DBs
NCBI-ProteinID:
BEG61310
LinkDB
All DBs
Position
353006..356506
Genome browser
AA seq
1166 aa
AA seq
DB search
MYSVEEFLKDLNPSQREAVLYNDGPSLVIAGAGSGKTRVLTYKIAYLLQTGYAPYNILAL
TFTNKAAREMKERISRIVGEDTASRLWMGTFHSVFLRILRTYADRIGFDSKFTIYDSADS
KSLIKAIIKEKALDDKLYKPATVQAIISNAKNALITPGAYAASKELIEADIRSKKPLIKD
IYAEYWNRCARAGAMDFDDLLLYTNILFRDHPDVRDHYRNIFRFILVDEYQDTNFAQHLI
VHQLAKDHNHICVVGDDAQSIYSFRGANISNILNLRTDYPGCRTFKLEQNYRSTRMIVAA
ANSLIEKNKEQIPKHVFSDNDEGSKVAVLNAYSDFEEGYMVANRISEMRAISGFSYSDFA
ILYRTNAQSRIFEEALRKKNIPYKIYGGLSFYQRKEIKDIVAYFRMTVNPHDEEALKRII
NYPSRGIGDTTLRKIGECATKHSVSLWQVVSDPLAYALSVNNGTLDKLKNFKELIDSFRE
AAEEKNAFDLAEQIVKQSGIFAAVFSDRTPENLSRQENLQELMNGVQEFCSLREEEGNES
VSLIDFLNEISLATDQDNDKEENSDKVTMMTVHASKGLEFTNVFVVGLEEDLFPSAMCKS
SEREIEEERRLLYVAITRAEKNCILSYAGTRYRNGSPTAMPPSRFLKDMDSRYLSLPSAL
NGDERPERREVDRFSSGNVFSRVHSRQWSDGQDSVNLKAKKSDLYNSEQYRPLTRMEQAV
SKETSGTLKQIGNIQVGSVIRHDRFGRGEVIDISGDGDNAKIGVEFENVGKKQLLLKFAK
FTVIENKIMDIEKIPSPCYVLDEALFRKNLELIRSVKERAGVNIILAFKAFALWKAFPIV
REYIPYSTASSVFEARLAYEEMGSPAHTYSPAYIDADFPAIMNYSSHITFNSLSQFQHFY
PQILAAGNKISCGLRINPEYSDVETDLYNPCAPGSRLGIVASILGDVLPQGVEGLHFHTL
CESSSYDLEKTLEQVEKKFGHLLPQVKWLNMGGGHLMTRKDYNVEHLIGVLKAFKERHPN
LEIIMEPGSAFAWQTGVLVSSVVDIVENHGIKTAILDVSFTCHMPDCLEMPYKPVVRGAT
DPVPGKPTYRLGGNSCLSGDYMGDWSFDKELKVGDKIVFEDMIHYTIVKTNMFNGIPHPA
LALWTKDEELKIWRTYTYDDYKNRMA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtgtggaagagtttttgaaagatcttaatccaagtcagcgggaagctgtttta
tataatgatggtccttcacttgttattgccggtgcaggatctggtaaaacccgtgtactt
acctataaaattgcatatctgttgcaaacaggctacgctccttataatatattagcattg
acttttaccaataaagcggcacgggagatgaaagagcgtatttcccgaatagtaggggaa
gatactgcatcccgtttgtggatgggcacttttcattcggtgtttttgcggattttgcgg
acctatgccgatcgtatcggttttgattctaaatttacaatttatgatagtgccgattct
aaaagtttgataaaagctattataaaagagaaagctttggatgacaagctttataagcca
gcaacggttcaagctattatctcaaatgcaaagaacgccttgattactcctggtgcttat
gcagcttcaaaagagttgatagaagcggatattcgttctaaaaaaccgcttataaaagat
atatatgcagaatattggaatcgttgtgctcgtgcgggggcgatggattttgatgattta
ctgctttataccaatattctgtttcgggatcatcccgatgttcgggatcattacaggaat
atatttcggtttatcttggtagatgaataccaagacaccaattttgcacagcatctcatt
gtgcaccaattggcaaaagatcacaatcatatatgtgtagtaggagatgatgcgcaaagt
atttattcgtttcggggagcgaatatcagcaatattttaaatttgcggacagattatccc
ggctgccggacatttaaattagaacagaattatcgttctacacgcatgattgtagctgct
gcaaacagcttgatcgaaaaaaataaagaacagattcccaaacatgtattttcggataat
gacgaggggagtaaagttgctgtgttgaatgcgtattccgattttgaagagggatatatg
gtggcgaaccgtatttccgaaatgcgtgccatttcgggattttcgtatagcgattttgct
attctttaccggacaaacgcacaatcccgaatttttgaagaagcattgcggaagaaaaat
attccttataaaatatacgggggattatcattctatcaaagaaaagagattaaagatatt
gtcgcctattttcgtatgacagtcaatccgcatgatgaggaagctttgaagcggattatc
aattatccttctcggggaataggagatactactcttcgcaaaataggtgaatgtgccacg
aagcatagcgtaagtttgtggcaggttgtctctgatcctctcgcttatgccctttctgtt
aataacggcacattggacaagttgaaaaatttcaaagagttgatcgactctttcagggag
gcagcagaggagaaaaatgcttttgatctggcagagcagatagtcaaacagtcgggaatt
tttgcagcggtattttctgaccgtactccggagaatttgagccgtcaggaaaatttgcag
gagttgatgaatggagtgcaggagttttgttctttacgtgaagaagaaggaaacgagtcg
gtttcattaatcgattttttgaatgaaatatctttggctaccgatcaggataatgataaa
gaggaaaatagcgataaagttacgatgatgaccgttcacgcatcaaaaggtcttgaattt
acgaatgtgtttgtcgtaggtcttgaagaagacctctttccgtcggcgatgtgtaagagt
agtgaacgggaaatagaagaggagagacggctgctttatgtcgcgattacccgtgcggaa
aaaaattgcatactttcgtatgcgggtactcgttatcgcaacggaagtcctacagctatg
cctcccagccgttttcttaaagacatggattctcgatatttatctttgccttctgccctc
aatggcgatgaaagaccggaaagacgggaggtggatcgtttctcttccggaaatgtattc
agtcgtgtacatagtcgtcaatggtcagacgggcaggattctgtaaacttgaaagccaag
aagtcagacctttataattcggaacagtacagaccgcttacacgaatggaacaagctgtt
tccaaggagacgtcaggaacattgaaacagatcggaaacatacaggtaggaagtgtgata
cggcatgatcgtttcggacgaggagaggttatcgatatttcaggagatggagataatgct
aaaatcggagttgaatttgaaaatgtcggtaagaaacaattactgcttaaattcgcgaaa
tttaccgtaatagaaaataagattatggatatagaaaaaataccctcgccttgttacgtg
ttggacgaggcgttgtttcgtaaaaatttagaactgattcgttcggttaaagaacgtgcg
ggagtaaatatcatattggcgtttaaggcgtttgctttatggaaagcattccccattgta
cgggaatatattccgtattcaacggcaagttccgtattcgaagcccggttggcttatgaa
gaaatggggagtcctgctcatacttattctccggcatatatcgatgccgattttccggct
attatgaattatagcagtcacataactttcaattctctcagtcagtttcagcatttttat
cctcaaattttagctgctgggaataaaatatcttgcggattacgtatcaatcctgaatat
tcggatgtagagacagatctttataatccgtgtgctcccggttctcgattgggaattgtt
gcttctatattaggtgacgtattgccgcagggagtcgaaggtttgcattttcatacgctt
tgtgaatcgtcatcgtatgatttagaaaaaacattggagcaggtagaaaaaaaattcgga
catttattaccgcaggttaaatggttgaatatggggggcgggcatcttatgactcgaaag
gattataatgtagagcatttgataggcgtattgaaagccttcaaagaacgacatcccaat
ttggaaattattatggaaccgggtagtgcatttgcttggcagactggggttctggtctct
tctgttgtagatattgttgaaaatcacggaataaaaaccgcaattttggatgtttcattt
acgtgtcacatgcctgattgcctggagatgccgtataaaccggtcgttcgtggagcgaca
gatcctgttccgggaaaaccaacatatcgtttaggtggaaattcttgcttgagtggagat
tatatgggagattggtcgttcgataaagaattgaaagtaggtgataagatcgtgtttgag
gatatgattcattatacaattgtcaaaacgaatatgttcaacggtattccacatccggca
ttagcattatggacaaaggatgaagaattgaaaatatggcgtacctatacttatgacgat
tataaaaatcggatggcttaa
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