KEGG   Coprobacter fastidiosus: Cfast33896_03170
Entry
Cfast33896_03170  CDS       T09127                                 
Symbol
uvrA_1
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
cfas  Coprobacter fastidiosus
Pathway
cfas03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cfas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Cfast33896_03170 (uvrA_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfas03400]
    Cfast33896_03170 (uvrA_1)
DNA repair and recombination proteins [BR:cfas03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cfast33896_03170 (uvrA_1)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Cfast33896_03170 (uvrA_1)
SSDB
Motif
Pfam: ABC_tran SMC_N UvrA_inter AAA_21 UvrA_DNA-bind AAA_16 AAA_29 nSTAND1 DnaJ_CXXCXGXG AAA_15 Viral_helicase1
Other DBs
NCBI-ProteinID: BEG61362
LinkDB
Position
complement(416130..418910)
AA seq 926 aa
MTDNSIFIKGARVNNLKNIDIEIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGRMSKPECDFIKGIPPAIAIEQKVNTRNPRSTVGTSTEIYDYLRLLYARIGKT
ISPISGKEVKKHQTEDIIRCMSNYSEGTRFSVLTILHIPKGRTLETQLEILLKEGYNRVE
YKGKTIRIEELEHTSNIDTSSLFLIIDRMTVSSEKNTISRLTDSAETAFFEGGGECILKF
YTEKGIEEHTFSKRFEADGITFEEPNDLMFSFNSPVGACPTCEGFGKVIGIDENLVIPNK
ALSVFDDAVMCWKGEKMSEWKKNLIRVAEASHFPIHRPYYQLTEREKELLWNGNHLFGGI
HDFFKMLEENQYKIQYRVMLARYRGKTVCPDCKGGRLKPQAQYVKIGGKSISELVALPIT
DLKIFFDTLALDEHDSIVAKRLLTEIKNRIGFLVNVGLGYLTLNRLSSTLSGGESQRINL
ATSLGSSLVGSLYILDEPSIGLHSRDTTLLIKVLRELQALGNTVIVVEHDEEIIRAADYI
IDIGPKAGRLGGEVVYQGDLSKLEKATKSYTVRYLTGEEKIETPAHRRKWNNYIKIEGAA
HNNLKGIDVIFPLHIMTVVTGVSGSGKSSLVRDVFFKSLSRFYEEDGEQPGIFNRLSGDM
HLVKHIEFVDQNPIGKSSRSNPATYLKAFDEIRKLYADQQAAKQMGFTPAYFSFNVEGGR
CEECKGDGTITVEMQFMADITLTCESCHGKRFKQDILEIEYRGKNINDVLEMTINQAIEF
FSEQQGSAEKKIIKRLKPLQDVGLGYIKLGQASSTLSGGENQRVKLAYFLSNEKQEPTIF
VFDEPTTGLHFHDIKTLLKAFDSLIEKGHTVVIIEHNMDVIKCADYVIDMGPEGGDKGGF
LVCAGTPEDIASCEKSYTGKYLKDKL
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgaccgataactcaatatttataaaaggcgctcgggtgaataatctcaaaaacatcgac
attgagataccccgggataaactaattgtaataacaggactctccggttcaggaaagtcg
tctttggcattcgatactttatatgcagaaggacaacgccggtatgtcgaaagcctttct
gcctatgcacggcaatttttaggacgcatgagcaaacctgagtgtgatttcataaaagga
atccctccggcaatcgcaatagaacaaaaagtcaatactcgaaatccccgttccacggta
ggcacttccaccgaaatttacgattacctacggctattatatgctcgtataggaaaaaca
atttctccaatatctgggaaagaggtcaaaaaacatcagacagaagatataatcagatgt
atgtctaattattcggaaggaacacggttctccgttctcacgatattgcatattcccaaa
ggccgaaccttggaaacgcaacttgagattttattaaaagagggatataatcgtgttgaa
tataagggaaaaaccattcggatagaagaattagaacatacatctaacatagacacgtca
tctcttttcttaataatagacagaatgactgtttcctctgaaaaaaatacaataagccga
ttgacagactctgcagaaaccgcattttttgaaggaggaggtgaatgtattcttaaattt
tatactgaaaaaggtatagaagaacatacattctcaaaacgatttgaagccgacggtatc
acttttgaagagccgaacgatctcatgttcagtttcaacagccctgtaggagcatgcccg
acttgtgaaggcttcggtaaggttatcggcatcgacgaaaatttagttattcccaataaa
gcgttatcggtatttgacgatgccgtcatgtgctggaaaggagaaaaaatgagcgaatgg
aaaaagaatttgattcgtgtagccgaagcttctcattttcccatacatcgcccttattat
caacttaccgaacgagaaaaggaacttttgtggaacgggaatcatcttttcgggggaatt
cacgattttttcaaaatgcttgaagaaaatcaatacaaaatccaatacagagtcatgctc
gctcgatatcgaggtaaaactgtttgtcccgattgcaaagggggtcggctaaaacctcaa
gcacaatatgtaaaaatcggaggaaaatctatttcggaattggtcgctttaccaatcaca
gatctaaaaatctttttcgacactttggcattagatgaacatgatagcattgtcgccaaa
agattgctgacagaaataaagaacagaataggttttcttgtaaatgtcggactgggttat
ctgacattgaatcgtctatcttccactctttcaggaggagaaagtcaacggatcaatctt
gcaacatctttaggaagcagtcttgtcggatctctatatattctggatgaacccagtatc
ggattacattcccgtgatacaactttacttataaaagtattaagagaactgcaagctttg
ggaaataccgtaatagtcgtagaacatgacgaagaaataattcgtgcagcagattatatc
atcgacataggacctaaagcaggacgtctcggcggagaggtcgtttatcaaggagacctg
tcgaaacttgaaaaagctacaaaaagctatacggttcggtatcttaccggtgaagaaaaa
atcgaaacgcccgcccaccgaaggaaatggaataactatataaaaatagaaggagctgca
cataataatctcaaagggatagatgtcatatttcctttacatataatgacagtagttacc
ggagtcagcggttcaggaaaatcatcactggtcagagacgtattttttaaatctctttcc
agattttatgaagaagacggggaacaacccggtatattcaaccgactttccggagacatg
catttggtaaaacatatcgaatttgtcgatcaaaatccgatcggtaaatcatcaagatct
aatccggcaacatacctgaaagcttttgatgaaatcagaaaattatatgccgaccagcag
gctgctaaacaaatgggatttaccccggcatacttttcgttcaacgtagaaggcggacgc
tgtgaagagtgtaaaggcgacggaactatcactgttgaaatgcaatttatggcagatatt
actcttacatgtgaaagttgccacgggaaaagatttaaacaagatatacttgaaatcgaa
tatcgaggaaagaatatcaatgatgtattggaaatgactatcaatcaggctatcgaattt
ttttcggaacagcaaggaagcgccgagaaaaaaatcatcaaaagactgaaacctctacaa
gatgtaggattaggatatattaagctcggacaggcttcttcgaccctttcgggtggagaa
aatcaacgggtaaagctcgcttattttttgagcaatgaaaagcaagagcctacgatattc
gtttttgacgaaccgacaacaggattacattttcatgatataaaaacattactaaaagca
ttcgattctttaatagaaaaagggcatacggtcgtaattatcgaacacaatatggacgta
attaaatgtgctgattatgtcatagacatgggtcctgaaggaggagacaaaggcggtttt
cttgtttgtgcaggaactccagaagatattgcgtcttgtgaaaaatcttacaccgggaag
tacttaaaagataaattatga

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