Coprobacter fastidiosus: Cfast33896_07110
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Entry
Cfast33896_07110 CDS
T09127
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cfas
Coprobacter fastidiosus
Pathway
cfas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cfast33896_07110 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfas03400
]
Cfast33896_07110 (nfo)
Enzymes [BR:
cfas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Cfast33896_07110 (nfo)
DNA repair and recombination proteins [BR:
cfas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Cfast33896_07110 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
IL32
Motif
Other DBs
NCBI-ProteinID:
BEG61756
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All DBs
Position
891092..891931
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AA seq
279 aa
AA seq
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MKYIGAHVSASGGVENAPENAFKIGATAFALFTKNQRQWKSSPLSRESIDLFHERCEKYN
YTAAQILPHDSYLINLGHPTNEGIEKSREAFLDEMQRCEQLGLRLLNFHPGSHLKEISLE
TCLDRIADSINMTLDATHDVTAVIENTAGQGSNVGYAFEHLAYIIDKVEDKSRVGVCIDT
CHTIAGGYDLTTEESYEATFRKFDEIIGFKYLRGMHLNDSKKGLGSHVDRHDSLGKGILG
KELFRRIMQDPRMDNIPLILETPDESIWAEEIQWLKEQI
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatataggagcacacgtaagcgcttcgggaggtgtagaaaatgcaccggaaaac
gcatttaagataggagctacggcatttgccttatttacaaaaaatcaaaggcaatggaaa
tcttcaccgctttccagagaaagcatcgatttatttcatgaacgatgcgaaaaatataat
tatacagcagcacaaatattaccgcatgacagttatttgattaatctcggacaccctacg
aacgaaggaatcgaaaaatcaagagaagctttccttgacgaaatgcaacgttgcgaacag
ttaggcctgcgactattgaacttccatccgggaagccatttgaaagaaatatcgctcgaa
acatgtctcgaccgcattgctgactctatcaatatgacattggatgcgacacacgatgta
acggccgtaatagaaaatacagcaggacaaggatctaatgtcggttatgcattcgagcat
ctcgcctatattatagataaagtagaagacaaaagccgtgtcggcgtatgcatagatacg
tgccataccatagccggaggatatgacctcacgaccgaagaaagttatgaagcgactttc
cgaaaatttgatgaaatcatcggattcaaatatttacgaggaatgcatcttaacgattct
aaaaaaggtttaggatctcatgtagacagacatgacagtttagggaaaggcattctcgga
aaagaattgttccgccgcatcatgcaagaccctcgaatggataatattccgctgattctt
gaaactcctgatgaatcgatctgggcagaagaaattcaatggctaaaagaacagatataa
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