Coprobacter fastidiosus: Cfast33896_08270
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Entry
Cfast33896_08270 CDS
T09127
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cfas
Coprobacter fastidiosus
Pathway
cfas03030
DNA replication
cfas03430
Mismatch repair
cfas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cfast33896_08270
03430 Mismatch repair
Cfast33896_08270
03440 Homologous recombination
Cfast33896_08270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfas03032
]
Cfast33896_08270
03400 DNA repair and recombination proteins [BR:
cfas03400
]
Cfast33896_08270
Enzymes [BR:
cfas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cfast33896_08270
DNA replication proteins [BR:
cfas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cfast33896_08270
DNA repair and recombination proteins [BR:
cfas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cfast33896_08270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
VapC50_C
Motif
Other DBs
NCBI-ProteinID:
BEG61872
LinkDB
All DBs
Position
complement(1028591..1029358)
Genome browser
AA seq
255 aa
AA seq
DB search
MQLNLKNPIVFFDLETTGVNIATDRIVEISYLKVYPNGKEECKTLRINPGIPIPPESTAV
HGISDADVANCQTFKEVAKTIAREIEGCDLAGYNSNRFDIPLLVEELLRAGVDIDLSKRK
MIDVQTIFHKMEQRTLSAAYKFYCDKDLNDAHTAEADTRATYEVLKSQLDRYENLPNDVA
ALAEFSTHNKNVDFAGRIVYNDKGEEVFNFGKYKGRSVAEVFKTDIGYYGWMMQGDFTLN
TKNVITSIKLRAFNK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaatcttaaaaatccgattgttttttttgatttggaaacaaccggagttaat
attgccaccgatagaattgtcgaaataagttatttaaaagtatatcctaacgggaaagaa
gagtgtaaaacattgcggattaatccgggaatacctattcctccagaatcgacagccgtt
catggaataagtgatgctgatgttgcaaattgtcagacatttaaagaagttgcaaaaacg
attgctcgtgaaattgaggggtgcgatttggctggttataattcgaaccgtttcgatata
cctcttttggtcgaagagctattgcgtgcaggggtcgatattgatctttcaaagcgaaag
atgatcgatgtacagactatttttcataaaatggaacaacgtacgttgtcggcggcctat
aagttctattgtgataaagatttaaatgatgctcatacggcagaggctgatacacgggct
acttatgaagttttgaagtcacaacttgatcgttatgagaatttacctaatgatgtagct
gcacttgcagaattttcgactcataataaaaatgtcgattttgccggtcgtatagtgtat
aacgataaaggtgaggaggtctttaattttggaaaatataaaggacgttctgttgccgaa
gtttttaaaacggatatcggatattatggctggatgatgcagggtgattttactttgaat
actaaaaatgtgattactagcatcaaattgagagcctttaataaataa
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