Coprobacter fastidiosus: Cfast33896_10030
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Entry
Cfast33896_10030 CDS
T09127
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cfas
Coprobacter fastidiosus
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfas03009
]
Cfast33896_10030 (rimO)
Enzymes [BR:
cfas01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Cfast33896_10030 (rimO)
Ribosome biogenesis [BR:
cfas03009
]
Prokaryotic type
ribosomal protein modification factors
Cfast33896_10030 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
RIM2a_ZnF
NAGidase
Motif
Other DBs
NCBI-ProteinID:
BEG62048
LinkDB
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Position
complement(1272138..1273433)
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AA seq
431 aa
AA seq
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MVKNRVDIITLGCSKNLVDSEHLMRQFEAAGYEVRHDAEKVTGEIVVINTCGFIGDAKEE
SINMILNFVAAKAKKKIKKLYVMGCLSERFMTELAGEIPEVDKFYGKFDWNKLLDDLGKE
YVPDLRLERILTTPSHYAYIKIAEGCNRMCSYCAIPIITGHYQSRPMEDIIEEIEMLVRK
GVKEFQIIAQDLTYYGMDIYKKFCIAELVDRIASVPGVEWVRLHYAYPARFPYDLLPVMR
KHANVCKYLDIALQHISDNMLRMMHRHVTKEETYELLSRIRKEVPGIHIRTTLMVGHPGE
GESDFEELKEFVRKARFERMGAFAYSEEEGTFSAEHYSDDIPEEVKQRRLDELMAIQEEI
AAEINVSKVGQEMKVIIDREEEEYYIGRTEFDSPEVDPEVLIGKEKPLIIGDFYNVRITD
AQTFDLFGEVL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaacagagtagatataataacattaggatgttctaaaaatttggtggattcg
gaacatcttatgcggcagttcgaagcggccggatatgaagtccggcatgatgcagaaaaa
gtaacgggagagatcgtggtgatcaatacctgtgggtttataggcgatgccaaagaagaa
tcgatcaatatgattttgaattttgttgcggcaaaagcaaagaaaaaaatcaaaaagctt
tatgtaatgggatgcctgtctgaacgtttcatgaccgagcttgcaggagagattcctgaa
gtcgataagttttacggaaagttcgattggaataaattgctggatgatttgggaaaggaa
tatgtgcctgaccttcgtttggaacgtatattgacaacgccttctcattatgcatatata
aaaatagctgaaggttgtaaccggatgtgttcttattgtgctatacctattataacggga
cattaccagtctcgtcctatggaagatatcattgaagagattgagatgttggtacggaaa
ggagtaaaagaatttcagattatagctcaagaccttacctattatgggatggatatttac
aaaaaattttgtattgccgaattggtagatcgcattgcttctgttcccggagtagaatgg
gtgcgattacattatgcttatccggcacgtttcccgtatgatctgttacccgtaatgcgt
aaacatgctaacgtttgcaaatatctcgatattgcattgcagcatattagcgataatatg
ttacggatgatgcatcgacatgtgaccaaggaagaaacttatgaactgctttcccgtatt
cggaaagaagtgcccggaatacatatccgcactactctgatggttgggcatcccggagag
ggagaatctgattttgaagaactgaaagagtttgtccggaaagcccggtttgaacgtatg
ggagcatttgcttattccgaagaagaagggactttttcggctgaacattattcggatgat
ataccggaagaagtgaaacagaggcggttggatgaattgatggctatacaagaagagatt
gctgccgagataaatgtttccaaggtaggacaggaaatgaaagtgattatcgatcgggag
gaagaagaatattatataggacgtacagagttcgattcgccggaagttgatcctgaagtt
ttgattggaaaagaaaagccgttgattattggagatttttataacgttcggattactgat
gcccaaacatttgatttgttcggagaggttttatag
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