Coprobacter fastidiosus: Cfast33896_15520
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Entry
Cfast33896_15520 CDS
T09127
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
cfas
Coprobacter fastidiosus
Pathway
cfas00052
Galactose metabolism
cfas00511
Other glycan degradation
cfas00600
Sphingolipid metabolism
cfas01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Cfast33896_15520
09103 Lipid metabolism
00600 Sphingolipid metabolism
Cfast33896_15520
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Cfast33896_15520
Enzymes [BR:
cfas01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Cfast33896_15520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
DUF4982
Glyco_hydro_2
Malectin
BetaGal_ABD2
Glyco_hydro_2_N2
TcaA_3rd_4th
Malectin_like
Mannosidase_ig
Motif
Other DBs
NCBI-ProteinID:
BEG62597
LinkDB
All DBs
Position
complement(2000263..2002938)
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AA seq
891 aa
AA seq
DB search
MRKNLVFVFLIALFATASAGVRTVYTINDRWKFCPGSPFDAQNIGADDSSWETVNIPHTW
NNLDGDDEIPGYYRGPAWYRKSIFVDESRENQSAVIVFEGANQVVELYVNGLYVGKHIGG
YTRFNFDISRFLNYGKKNVFAIKVDNGYDPNIPPLSADFTFYGGIYRDVYLMFVDKVHLA
TNDYASSGVYIRTPEVTEKKAVVEITSLVSNDTDSPVEIILENKICDATGKEVKSLRTNL
KIASRTTETGIQKKIIIDNPLLWDIDNPHRYQVYTRVYDKKGDVLYDEVSNPLGLRWFEF
DPERGFFLNGKPRKLVGNNRHQDYLAKGNALRDEMHVRDILLMKQMGSNFLRVSHYPQDP
VIMEMCDKLGIVTSVEIPVVNAVTDTPEFLENSVNMVKEMIRQDFNRPSVMIWGYMNEIL
LRRPRTDEDFLKSYYPVVEKTARTLENTIRKEDTSRYTMMAYHNAPDFYERAHLTEIPMI
MGWNLYQGWYEPDIDEFQRLLDRAHDKYKGKVLLVTEYGPGVDPRLHSYKPERFDFSQEY
GIIYHRHYLREMMARPFIAGFTMWNLNDFYSESRIDAVPHVNNKGVTGLDRERKDTYLFY
EASLGNKDVLRIGNREWKNRGGVVNTVENTCVQSVPVFSDYPVVELYVNGKSIGSKKCEE
NIAFFDVPFVNGENVVEAVARKNGKELRDMIRIDFKLIPDDLKNGDVPFTEMNVMLGSPR
YFEDRTAEMIWIPEQPYKPGSWGYIGGEPYRRKTGFGSMLGSDIDIFGTDNNPIFQTQRT
GLEAFKADVPDGEYSVYLYWAELDTDKKKESLVYNLGADTENGGYSKRTFGLEINGNPVM
DKVDIAEDYGFGCAVIQKFIVNVNDGKGLTVGFKRIEGEPILNAIRIYKNY
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagaacttagtatttgtttttctaatagcattgttcgcaacagcttcagccgga
gtacgaacagtctatacgataaatgaccgatggaagttttgtccgggatctccttttgat
gcgcaaaatatcggagctgatgatagctcgtgggaaaccgtaaatattcctcatacttgg
aataatcttgacggagatgatgagatcccgggatattacagaggtccggcgtggtatagg
aaatctatatttgtagatgagtcccgggaaaatcagagtgcggttattgtttttgaggga
gcgaatcaggtcgtggaactttatgtaaacggactttatgtgggtaaacatataggggga
tatacccgatttaattttgatatcagccgtttccttaattatggaaagaaaaatgttttt
gctataaaagtagataacgggtatgatcctaatatacctccgttgtcggcagattttacc
ttttatggaggcatttatagagatgtttacctgatgtttgtcgataaggtacatttggcg
acaaatgattatgcgtcttcgggagtatatattcgtacacctgaagtgacagagaaaaaa
gcggttgtggagattacctctttggtcagtaacgatactgattctcctgtggaaattatt
cttgaaaataaaatatgcgatgctaccggaaaagaggtgaaatctttgcggacaaatctg
aaaattgcatctcggactacggaaaccggtatacaaaagaaaatcataatcgataatcct
ttgctttgggatattgataacccgcatcgctatcaagtttatacacgtgtttatgataaa
aagggcgatgtcctttatgacgaagtttctaatccgctcggacttcgttggtttgagttc
gacccggaacgggggtttttcttgaacggtaagccgagaaagctggtcggaaataatcgg
catcaggattatctggctaagggaaatgctttgcgggatgagatgcatgtcagggatatt
ttgttgatgaaacagatgggaagcaacttcttgagagtatctcattatcctcaagacccg
gttattatggagatgtgcgataagttgggaattgtaacttccgttgaaataccggttgtg
aatgcggttaccgatacgccggaatttcttgagaattcggtaaatatggtgaaggagatg
atccggcaggattttaatcgcccgtcggtaatgatctggggatatatgaatgaaatattg
cttcggcgtccgcgtacggatgaggattttctaaaatcttattatcccgttgtggaaaag
acagcgagaacgttggaaaatactattcgaaaagaagatacgtcccgttatacgatgatg
gcataccataatgctcctgatttttatgaacgggctcatttgacggagataccgatgatt
atgggatggaacttgtatcaaggatggtatgaaccggatatcgatgaatttcaaaggctt
cttgacagggctcatgataagtataagggaaaagtgttgttggtgactgaatatgggccg
ggagttgatccgagactacactcttataaaccggagagatttgatttttctcaagagtac
ggaattatttatcatcgtcattatttgcgggaaatgatggcacgtccgtttattgccgga
tttacaatgtggaatctgaatgatttttattccgaatcccgaatagatgccgtgcctcat
gtaaataataagggtgtaacggggctcgatcgtgagcgtaaagatacctatttgttttat
gaggcgtctttagggaacaaagatgtcttgcgcataggtaaccgagaatggaaaaatcga
ggaggagtcgtaaatacggtagaaaatacatgtgttcaatctgttcctgtattttctgac
tatccggtggttgagttatatgtaaacggcaaaagtatcgggtcgaaaaaatgcgaagag
aatatcgcgttttttgatgttccgtttgtcaatggagaaaatgttgtggaagcagttgcc
cgtaaaaacgggaaagagctgcgtgatatgattcggatcgatttcaaacttattcccgat
gatttgaaaaatggagacgttccttttaccgaaatgaatgttatgctcggttctccccgt
tattttgaagatcgtacggcagaaatgatctggatacccgaacagccttataaaccggga
agttggggatatatcggaggtgagccttatcgcagaaaaacaggcttcggttcgatgtta
ggttctgatatagatatattcggaacggacaataatccgattttccagactcaacgtacc
ggtttggaagcttttaaagcggatgtcccggatggagagtattcggtatatctttattgg
gcggaattggacactgataaaaagaaagaatctttggtatataatcttggcgcggatacg
gaaaacggggggtatagtaagcgtactttcggattggaaataaatggtaatccggtaatg
gataaggtcgatattgctgaagattacggttttggttgtgctgttatccagaagttcatt
gtgaatgtaaatgacgggaaaggcctgactgttggttttaaacgtatagaaggagaaccg
atattgaatgctattcgcatttataaaaattattag
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