Coprobacter fastidiosus: Cfast33896_16910
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Entry
Cfast33896_16910 CDS
T09127
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cfas
Coprobacter fastidiosus
Pathway
cfas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cfast33896_16910 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfas03019
]
Cfast33896_16910 (pnp)
03016 Transfer RNA biogenesis [BR:
cfas03016
]
Cfast33896_16910 (pnp)
Enzymes [BR:
cfas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Cfast33896_16910 (pnp)
Messenger RNA biogenesis [BR:
cfas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cfast33896_16910 (pnp)
Transfer RNA biogenesis [BR:
cfas03016
]
Prokaryotic type
tRNA degradation factors
Cfast33896_16910 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
RNase_II_C_S1
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
BEG62736
LinkDB
All DBs
Position
complement(2178014..2180176)
Genome browser
AA seq
720 aa
AA seq
DB search
MINPIKKTIDLGDGRTITIETGKLAKQADGAVEVRMGNTMLLATVVSAQEAGEGVDFMPL
QVEYKEKYSAYGRFPGGFTKREGRASDYEILTARLVDRVLRPLFPDNYHADTFVNIIMFS
SDGHDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQFKINPTFEELEKADIDIMV
GATMENIMMVEGEMDEVSEAELLEAMKVAHEAIKKQCQVQIELAEAVGSTVKRTYCHEVN
DEELRKDVWEKCYDKAYAIAQSGNANKHARSEAFEAIVTEYLAGMDAEAAAEKEALVKRY
YHDVEKEAVRRCILDEGKRLDGRTTTQIRPIWCEVDYLPGPHGSAVFTRGETQSLSTVTL
GTKLDEKIVDDVLDQTRERFLLHYNFPPFSTGEAKAQRGVGRREIGHGNLANRALKRMIP
KDYPYVIRIVSDILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLITDKDNVKFA
ILSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEVLEKALAQAREGRMHILGK
ILETIPEPRPDMKPHAPRIETLTIPKDMIGAVIGPGGKIIQGIQEATGAVVTIEEVDNIG
RIEIAAPCRESIDAALSRIKGIVAVPEEGEVYTGKVKSILAFGAFIEFMPGKDGLLHISE
ISWDRIESMEQSGIKEGDEVTVKLIEIDKKTGKFRLSMKALQPRPERQDKRDRSKKENKD
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgattaatcctattaagaaaacgatcgatttaggagatggaagaaccatcacgatcgaa
actggaaaattggctaaacaagctgacggggcagtagaagtccgaatgggtaataccatg
cttttggctaccgtagtgtcggcacaggaagccggcgaaggggtggattttatgccctta
caagtagagtataaagagaaatattcagcttacgggcgtttcccgggaggttttacaaag
agagaaggccgtgcttcggattatgaaatcttgacggcacgtttggttgaccgtgtatta
cgtcctttgttccctgataattatcatgcagatacgttcgtaaatataataatgttttct
tctgacggtcacgatatgcccgatgcattagccggattggcagcatcagcagctcttgcc
gtttctgatattccgtttaacggtcctatctctgaagttcgtgttgctcgtatcgacgga
caatttaaaattaatcctacattcgaagagttggaaaaagccgatatcgatattatggta
ggagcgactatggaaaatatcatgatggtagagggagaaatggatgaagtttcggaagca
gaattgctcgaagcgatgaaagtcgctcatgaagctatcaagaaacagtgtcaggtgcaa
atcgaattggcggaagctgtcggttctactgtaaaacgtacctattgccatgaagtgaat
gacgaagaacttcgtaaggatgtttgggaaaaatgttatgacaaggcttatgctatagca
cagtctggtaatgcgaataaacatgctcgttctgaagcttttgaagctatcgtaaccgag
tatcttgccgggatggatgctgaggctgccgcagaaaaggaagctttggtaaaacgctat
tatcatgatgtcgagaaagaagctgttcgtcggtgtattttggatgaagggaaacgtttg
gacggtcgtaccacgacacaaattcgtcctatctggtgtgaggtggattatcttccagga
cctcacggatcggcagtatttacacgtggagaaactcaatctttgtcaacagtgacattg
ggtactaaactggatgagaaaattgttgacgatgtgctggaccaaactcgtgagcgtttc
ttacttcattataatttccctccgttctctaccggtgaggctaaagcgcaaagaggagtc
ggccgtcgggaaatcggtcatggtaatttggcaaatcgtgcattgaaacggatgatccct
aaagactatccttatgtgattcgtatcgtgtcggatattcttgaatcaaacggctcttct
tctatggcaacggtttgtgccggaactttggcattgatggatgccggggttaaaatcaag
aagcctgtatccggtatcgctatgggattgattacggataaagataatgtgaaatttgct
atattgtccgatatacttggagatgaagaccatcttggagacatggactttaaggtaaca
ggtacaaaagacggtattacggcaacccaaatggatataaaagttgacggactttcttat
gaagtacttgaaaaggctttagcacaagctcgtgaaggtcgtatgcatatacttggtaaa
attcttgaaacgataccagaaccgcgtcctgacatgaaacctcatgctccgcggatcgaa
actttgactattccgaaagatatgatcggtgcggtaataggtccgggcggtaaaattatt
caaggaattcaagaagcaacaggagctgttgttacgattgaagaagtggataatatcgga
cgtatcgagattgctgcaccttgccgggagtctatcgatgcggctctgtccagaatcaaa
ggtatagtggctgttcccgaagaaggggaagtttataccggaaaagtaaaatcgattctt
gcttttggtgcatttattgagtttatgccgggaaaagacggtttgttgcatatttcggag
ataagctgggatcgcattgaatcgatggaacagtctggaattaaagaaggagatgaggtt
acggttaagttgatcgaaatcgataaaaagaccggaaagttccgcctttctatgaaagca
ttacaacctcgtcccgaacgtcaagacaaacgtgaccgttcgaaaaaagaaaacaaagat
taa
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