Coprobacter fastidiosus: Cfast33896_18340
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Entry
Cfast33896_18340 CDS
T09127
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cfas
Coprobacter fastidiosus
Pathway
cfas03030
DNA replication
cfas03410
Base excision repair
cfas03420
Nucleotide excision repair
cfas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cfast33896_18340 (polA)
03410 Base excision repair
Cfast33896_18340 (polA)
03420 Nucleotide excision repair
Cfast33896_18340 (polA)
03440 Homologous recombination
Cfast33896_18340 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfas03032
]
Cfast33896_18340 (polA)
03400 DNA repair and recombination proteins [BR:
cfas03400
]
Cfast33896_18340 (polA)
Enzymes [BR:
cfas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cfast33896_18340 (polA)
DNA replication proteins [BR:
cfas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cfast33896_18340 (polA)
DNA repair and recombination proteins [BR:
cfas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Cfast33896_18340 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cfast33896_18340 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
HHH_5
Aerolysin
Motif
Other DBs
NCBI-ProteinID:
BEG62879
LinkDB
All DBs
Position
complement(2367084..2369864)
Genome browser
AA seq
926 aa
AA seq
DB search
MQEKKLFLLDAYALIYRSYYAFIKNPRINSKGVNTSAIFGFVNTLEDVLKKENPSHIAVG
FDPSGPTFRHEAYELYKAQREETPEVIRQSVPIIKEIIKAYNIPIIEVPGFEADDVIGTL
AKLAEKEGFDTYMMTPDKDYGQLVSPHIFIYKPKFGGGDFEVRGVEEIKQKFSIERPEQV
IDILGLMGDASDNIPGCPGVGEKTAIKLVNEFGSIENLLCCTDQLKGALRKKVEENKQQI
EFSKFLATIKTDVPIIFNEKELLREAINEIRLREIFEELEFRNLADRVLGTTVNKTTVSK
TPIQASLFDVFPDENTEEEKYSILSELKTIEHDYQIIDNENKISDLITELENAEYFAFDT
ETTGIDPISAELVGMSFALQENKAFYVPIPTERDKANQLVNKFKNALENTNSLKIGQNIK
YDYIVLRNYGITVKGKFFDTMVAHYLLQPEQRHNMDYLAEIYLKYKTVHIEELIGPKGKN
QLSMRQVPIEKISEYAAEDADITLKLKNVFEKELKKEGLEPLFYSIEMPLIRVLAEMEIT
GVRVDTEALRQSSILLTEKVLQLEQEIYQLAGTEFNVSSARQVGEVLFERLKIDEKAKKT
KTGQYSTTEEILEKLRSKHPIVGKILEQRGVKKLLSTYVNALPELINPKTGKIHTSFNQT
VTATGRLSSSNPNLQNIPIRDSEGREIRRAFIPDDRCLFFSADYSQIELRIMADLSEDPN
MIEAFTSGKDIHAATAAKIYKIPIEEVTPNMRRKAKTANFGIIYGISVFGLSDRLNIPRS
EAKELINGYFETYPHIKEYMDKSIQIAREKGYVETISGRKRMLPDINSKNSIVRGYAERN
AINAPIQGSAADIIKIAMVRIFDRFEKNGLKARMILQVHDELNFSVPENEIEIVEHIVKE
EMENAYQLKVPLIADSGIGKNWLEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaaaaagctatttttactggatgcctacgcactcatctaccgctcatattac
gcattcatcaaaaatccgagaatcaactctaaaggagtaaatacctccgctatattcgga
tttgtaaatacgttggaagacgtactgaaaaaagaaaatccttcccatattgcagtagga
ttcgatcccagtggtccgactttcaggcacgaagcatatgagctttataaagcacagaga
gaagaaactccggaggtaataagacaatccgtacctattataaaagaaattatcaaagcc
tacaatatacctatcatagaagttcccggtttcgaagccgatgatgtcataggcacactg
gccaagctggctgaaaaagaagggttcgatacgtatatgatgaccccggataaagactac
gggcaattggtcagtcctcacatttttatctacaaacccaaattcggaggaggagatttc
gaagtacgcggagttgaagaaataaaacaaaaattctccatcgaacgtcctgaacaggtt
atcgatatactcgggcttatgggcgatgcgtcagacaatatcccgggatgtcccggcgta
ggagaaaaaacagcgataaaactggtcaatgaattcggctctatcgaaaatttactttgc
tgtaccgatcagttgaagggtgcgttacgcaaaaaagtagaagaaaacaagcaacaaata
gaattttccaaatttctggcaacgataaaaacagacgtccccataattttcaatgaaaaa
gaattattacgagaagcgataaacgaaatccgattacgggaaattttcgaggaacttgaa
tttaggaatttagcagatcgagtattaggtacaacagttaacaaaacaactgtttcaaaa
acacctattcaagcttctctctttgacgtatttccggacgagaatacagaagaagaaaaa
tattcgattctcagtgagttaaaaaccatagaacatgactatcaaataattgataatgag
aacaaaatatctgatttaataaccgaattagaaaatgcggaatattttgcttttgacaca
gaaactaccggaatcgatccgatatcggccgaattggtaggaatgtcatttgcattacaa
gaaaataaagcattttatgttcctatcccgacagaacgggataaagcgaatcaacttgta
aataaatttaaaaatgcattagaaaatacaaactcattaaaaataggtcaaaatataaaa
tacgactatatcgtattgagaaattatggaatcactgtaaaagggaaattcttcgacaca
atggtagcccattatttattgcagcccgaacaacgccataacatggactacttggctgaa
atttatctcaaatacaaaaccgtacacattgaagaacttatcggtcctaaaggaaaaaat
cagctatcaatgcgccaagtgccgatcgaaaagatcagtgagtatgccgccgaagacgca
gatataacactaaaactaaaaaatgtcttcgaaaaggaattaaaaaaagaaggtctcgaa
cccctcttctactccatcgaaatgccgttaatacgagtattggcagagatggaaatcacc
ggagtcagagtcgataccgaagctttgcgccaatcttcgattctacttaccgaaaaagtt
ctgcaactcgaacaggaaatttatcaattggcaggaacagaattcaatgtcagttcggca
cgacaagtaggagaagttttgttcgaacgtcttaaaatcgatgaaaaagccaaaaaaaca
aaaaccggacaatattctacgaccgaagaaattctggaaaaactccgttccaaacatcct
attgtaggaaaaatattagaacaacggggagtaaaaaaacttctgtccacgtacgtcaat
gctctgcccgaacttatcaatcccaaaacaggaaagatacatacttcatttaaccagacg
gtaactgccacaggacgattaagttcaagtaatcctaatcttcagaatatacccatcaga
gacagtgaaggacgagagatacgcagggcttttattcccgatgaccgatgcctgtttttc
tcggctgactactcccagatcgagttgcgcatcatggccgatctcagcgaagatcccaat
atgatagaagcttttacctcaggcaaagacattcatgctgctacagctgccaaaatatac
aaaataccgatcgaagaagtaacgcccaatatgcgtagaaaagcgaagaccgccaacttc
ggtattatctacggaatttccgtattcggactttcagacaggctcaatatacctcgatct
gaagccaaagaactgataaacggatatttcgagacatacccccatataaaagaatatatg
gataaaagcatacagatagcccgagaaaaagggtatgtagaaacgataagcggacgcaaa
cggatgttacccgacattaattccaaaaacagcatcgtacgcggatatgccgaacgaaat
gcaataaatgcacctatacaaggaagcgctgcagacattataaagattgccatggtccgc
attttcgaccgattcgaaaagaatgggctaaaggcccggatgattcttcaagtacatgac
gaactcaatttcagtgttcctgagaacgaaatagaaattgttgagcatatcgtaaaagaa
gaaatggaaaatgcataccaactaaaagtccctttaatagctgattccggtatcggaaaa
aactggctcgaagcacattaa
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