Coprobacter fastidiosus: Cfast33896_18630
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Entry
Cfast33896_18630 CDS
T09127
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cfas
Coprobacter fastidiosus
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfas03032
]
Cfast33896_18630 (gyrB)
03400 DNA repair and recombination proteins [BR:
cfas03400
]
Cfast33896_18630 (gyrB)
Enzymes [BR:
cfas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Cfast33896_18630 (gyrB)
DNA replication proteins [BR:
cfas03032
]
Prokaryotic type
DNA Topoisomerases
Cfast33896_18630 (gyrB)
DNA repair and recombination proteins [BR:
cfas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cfast33896_18630 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
DUF1932
Motif
Other DBs
NCBI-ProteinID:
BEG62908
LinkDB
All DBs
Position
2408723..2410678
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AA seq
651 aa
AA seq
DB search
MSEELNVDSAAYSADSIQVLEGLEAVRKRPAMYIGDIGIKGLHHLVYEVVDNSIDEALAG
YANHIDVIINEDNSITVIDNGRGIPVDMHEKEHKSALEVVLTVLHAGGKFDKGSYKVSGG
LHGVGVSCVNALSTYLRAEVKRNGKIYMQEFSCGKPLHDVEVIGTTEETGTIITFRPDAD
IFTDVVYKFDILASRLRDLGYLNAGIYLSLTDKREVLENGDFRKEEFFSVEGLKEFVRYI
DSTKEHLFEDIIHISTERQGVPVEVAMTYNTSYNENLFSYVNNINTIEGGTHVAGFRRGL
TRTLKKYAEDSKMLEKVKVEISSDDFREGLTAVISVKVMEPQFEGQTKTKLGNNEVIGAV
DVAVSEALRNFLEENPKQAKAIVEKVILAATARHAARHAREMVQRKSPLSGGGLPGKLAD
CSQRNPEVCEIFLVEGDSAGGTAKQGRDRAFQAILPLRGKILNVEKAMHHKVLESQEIRN
IYTALGVTIGTEDDTKEANISKLRYHKIIIMTDADVDGSHIATLIMTFFFRHMRPLIENG
YLYIATPPLYLCRKGKIEEYCWTEQQRTQFALKYANGDVNQIYTQRYKGLGEMNSHQLWE
TTMDPAHRTLRQVTIDNAAEADRVFSMLMGEEVGPRREFIEAHATYANIDA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaattaaatgttgatagcgctgcgtattctgcggatagtattcaagtgctg
gaaggtcttgaagccgtaaggaaacgccctgctatgtatattggagatattgggataaaa
gggttgcatcatttggtgtatgaggtagtagataactctattgacgaagcgcttgccgga
tatgccaatcatatcgatgttattatcaatgaagataattctattaccgtgatagataac
ggtcgtggtattccggtagatatgcatgaaaaagaacataaatctgcattggaagtcgtg
ttgaccgtattgcacgcaggaggtaagttcgataaaggctcttataaggtttccggaggt
ttacatggggtcggcgtatcgtgtgtaaatgctctgtcgacttatttgcgtgcggaggta
aagcgtaacggaaaaatatatatgcaagagttttcgtgcggaaaacctttgcatgatgta
gaggttatcgggactaccgaagagaccggaacgataataactttcaggccggatgcggat
atatttacggatgtagtttataaatttgatattttggcttctcgtctgcgtgatttggga
taccttaatgccgggatttatttgtctcttaccgataaacgtgaagtacttgaaaacgga
gatttccgtaaagaagaatttttctcggtggaggggctgaaagaatttgtccgttatatc
gatagcacgaaggagcatctttttgaagatattattcatatttctactgagcgccaaggt
gttccggtagaggttgcaatgacttacaatacgtcttataatgagaacttgttctcatac
gtaaataatatcaatacaatcgaaggcgggacacacgttgccggctttcgtagggggctg
acccgtacgctgaaaaaatatgctgaagattctaaaatgctcgagaaggtaaaagtggag
atcagtagcgatgacttccgagaaggtcttacggcagttatttccgtgaaagtcatggaa
cctcaatttgaaggacaaaccaagacaaaattagggaataacgaggttatcggagctgtc
gatgtcgctgtcagcgaagctctccggaatttcttggaagagaatccgaaacaggctaaa
gcaatagtagagaaggtcatattggcggcgactgcacgtcatgccgcacgtcatgcccgg
gaaatggtgcaacgtaaatctcctctttcgggtggaggtcttcccggtaaattggcagat
tgttctcagcgtaatcctgaagtttgtgagatattccttgtcgaaggagattctgcagga
ggaacggcaaaacaggggcgggatcgtgcctttcaggcaatattgcctttgcgcggtaag
atattgaatgttgaaaaagcgatgcatcataaagtgctcgaaagtcaggaaatccgtaat
atatatacagctttaggagttactatcggtacggaagacgatacgaaggaagctaatatt
tcaaaattgcgttatcataagatcattattatgaccgatgccgatgtggacggtagccat
attgcgacattgatcatgactttctttttccgtcatatgcgtcctttgatagagaacggt
tatctctatattgcgactccgccgctgtatttatgtagaaagggcaaaatagaagaatat
tgctggacagagcaacaacgtacgcagtttgccctgaaatatgcgaatggggatgttaac
caaatttatacgcaacgctataaaggtttgggagagatgaattctcatcaactatgggag
acgactatggatccggcacatcgtacattacgtcaagtaacaatcgataatgcggcagaa
gcagatcgggtattttcaatgttgatgggagaggaagtcggtcctcgtcgtgaatttatc
gaagcgcatgccacttatgcgaatatcgatgcttaa
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