Coprobacter fastidiosus: Cfast33896_23730
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Entry
Cfast33896_23730 CDS
T09127
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cfas
Coprobacter fastidiosus
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfas03016
]
Cfast33896_23730
Enzymes [BR:
cfas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Cfast33896_23730
Transfer RNA biogenesis [BR:
cfas03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Cfast33896_23730
Prokaryotic type
Cfast33896_23730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
BEG63418
LinkDB
All DBs
Position
complement(3086518..3087432)
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AA seq
304 aa
AA seq
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MENFELTILGCGSAMPTTRHYPSSQILNHRERLFMIDCGEGAQLQYRRNKIKFTRLQHLF
ISHLHGDHCFGLIGLISTLGILGRTSELIIHAHSDAERVFRPQLDYFCRDLPFNVRFNAI
STNQNEMIYEDKALKVSTLPLRHRIPTCGFLFEEKEKERHLIRDMIQFYNIPIRELAKIK
QGEDFITPEGLIIPNERLSRPADPVSRYAYCSDTIYQEKLIPLIEGVDLLYHEATFAEDN
KARAKETFHSTAVQAATLAQKAHVKKLILGHFSARYQDDSIFLQEAQEIFPHTIIAKESM
QIRF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacttcgaactaactattttaggatgcggatcagccatgcctacaactcgccac
tacccaagttctcagattctaaatcacagagaacgtctttttatgatagactgcggagag
ggagctcaattacaatacagaagaaacaaaataaaatttaccagattacaacatcttttc
atttcgcatttacatggagaccactgcttcggattgataggactgatctccaccttaggt
atattgggacgcacatccgaactgattattcatgcacattcggatgcagaacgcgtgttc
agacctcaattggattatttttgccgggacttaccatttaacgttcgttttaatgccata
tctacgaatcaaaatgaaatgatctacgaagataaagcattaaaagtttccaccttacct
ttacgtcaccggataccgacatgcggattcttatttgaagaaaaagaaaaagaaagacat
ctaatccgcgatatgatacaattttacaatatccctatcagagaacttgccaaaataaaa
caaggtgaagattttattacgcctgaagggttgattatccctaatgaacgattaagccga
cctgctgatccggtttcccgatacgcctattgctctgatactatttatcaagaaaaactt
attcccttgattgagggagtagacttgttatatcatgaagcgacattcgcagaagataac
aaagcccgagcaaaagaaacctttcactcaacagcagtacaagccgccacccttgcacaa
aaagcacacgtcaagaaattaatattaggacatttctcggcccgttatcaagacgactct
atttttttgcaagaagcccaagaaatttttccacataccatcattgctaaagaaagtatg
cagatacgtttctga
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