KEGG   Coprobacter fastidiosus: Cfast33896_24860
Entry
Cfast33896_24860  CDS       T09127                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cfas  Coprobacter fastidiosus
Pathway
cfas03030  DNA replication
cfas03430  Mismatch repair
cfas03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cfas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Cfast33896_24860
   03430 Mismatch repair
    Cfast33896_24860
   03440 Homologous recombination
    Cfast33896_24860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfas03032]
    Cfast33896_24860
   03400 DNA repair and recombination proteins [BR:cfas03400]
    Cfast33896_24860
Enzymes [BR:cfas01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Cfast33896_24860
DNA replication proteins [BR:cfas03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Cfast33896_24860
DNA repair and recombination proteins [BR:cfas03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Cfast33896_24860
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 Longin_2
Other DBs
NCBI-ProteinID: BEG63531
LinkDB
Position
complement(3224351..3224851)
AA seq 166 aa
MINNFIAIDFETANKYRSSACSMGLVIVNNGLITREWETLIKPQPFFFSHWSTAIHGITP
DKVMDAPTFEEVWSRIDSWFVKCDAIVAHNAPFDMSVLHACLEKAQIASHLPESICTYRL
ARKKLPFLRNHKLNTVSEYFQIPLNHHDALSDARAAAKLMLRLSEI
NT seq 501 nt   +upstreamnt  +downstreamnt
atgatcaacaattttatcgcaatagattttgaaactgccaacaaatacagaagcagtgct
tgttctatgggattagtaatcgttaataacggactaataacaagagaatgggaaactctt
ataaaacctcagccttttttcttttcacactggagtacggccatacatggaattaccccc
gataaggtaatggatgctccgacgtttgaagaagtctggagtcggatcgattcgtggttt
gtcaaatgcgacgcgattgtcgcacataatgcaccttttgacatgagcgttctgcatgct
tgtctcgaaaaggctcaaatcgccagtcatcttccggaaagtatctgtacttatcgatta
gcccgcaaaaaactgccatttctcagaaatcataaactcaacactgtcagtgaatatttt
caaattcctcttaaccaccatgatgcattgagtgacgcccgagcagctgcaaagttgatg
cttcgtctctccgaaatttaa

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