Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase subunit B
|
KO |
|
Organism |
cfb Clostridium felsineum DSM 794
|
Brite |
KEGG Orthology (KO) [BR:cfb00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cfb03032]
CLFE_000980 (gyrB)
03400 DNA repair and recombination proteins [BR:cfb03400]
CLFE_000980 (gyrB)
Enzymes [BR:cfb01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CLFE_000980 (gyrB)
DNA replication proteins [BR:cfb03032]
Prokaryotic type
DNA Topoisomerases
CLFE_000980 (gyrB)
DNA repair and recombination proteins [BR:cfb03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLFE_000980 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(98536..100449)
|
AA seq |
637 aa
MSEKNEIYDESQIQVLEGLEAVRKRPGMYIGSTGTRGLHHLVYEIVDNSIDEALAGYCSH
IKVIVHKDNSVTVSDDGRGMPVGIHHKMKKPTVEVIMTILHAGGKFGGGAYRVSGGLHGV
GASVVNALSETCEVEVKTEGHIWKQTYHRGKVASPFEKIGDSQDHGTRIYFKPDPEIFED
IEYDYDTLSQRLRELAFLNKGIKIQLTDERNDKNELFHYEGGLKSFVSYLNRNKEVVFKE
PIYVEGSTGGNYSVEIALQYNDGYNESIFSFANNIHTIEGGTHLAGFKTALTRVINDYAK
KFGYLKENDKNLSGEDIREGLTAVVSVKLTEPQFEGQTKTKLGNTEVRGIVDSIISERVS
NYLEENPQIGKLVIDKALVASRAREAAKKAREITRRKSVLESTSLPGKLADCSSKDAEEC
EIYIVEGDSAGGSAKQGRNRQFQAILPLRGKIMNVEKQRIDKILNSEEIKAMATAFGGGI
GKDFDVSKLRYHKIIIMTDADVDGAHIRTLILTFFYRYMTELISEGHVFIAQPPLYKVSK
ARKEYYAYSDKELDDVLQNVGGKDKSTDIQRYKGLGEMNPEQLWETTMNPDQRTLIKVNI
EDAMAADEIFTILMGDKVDPRRKFIEENATKVVNLDI |
NT seq |
1914 nt +upstreamnt +downstreamnt
atgtcagaaaaaaatgaaatttatgatgaaagtcaaatacaggttcttgaaggtcttgaa
gctgtaagaaaaagaccaggaatgtacataggaagtactggtacgcggggcttacatcat
cttgtatatgagatagttgataatagtatagatgaagctttagccggatattgcagccat
ataaaagttattgtacataaagataattcagtaacagtatccgatgatggtagaggtatg
cctgtaggaatacaccataaaatgaaaaagccaactgtagaagtaataatgactatactt
catgcaggaggaaaatttggaggtggagcttacagagtatcaggaggacttcatggagtt
ggtgcgtctgttgttaatgcactatctgaaacttgtgaggttgaagtaaagacagaaggg
catatatggaaacaaacatatcataggggtaaggtggcatcaccttttgaaaaaataggt
gatagtcaagatcatggaacaagaatatattttaagccagaccctgaaatattcgaagat
atagaatatgattatgacactttatcacaaagattaagggaattggcatttttaaacaaa
ggaataaaaatccaacttactgatgagagaaatgacaaaaatgagcttttccattatgaa
ggcggcttaaagtcatttgtgtcatatttaaacagaaataaagaagttgtttttaaagag
ccaatttatgtagaaggttcaacaggtggtaattattctgttgagatagcacttcaatac
aatgatggatataacgaaagtatattttcttttgcaaataatatacacacaattgaaggt
ggaacacatcttgctggatttaaaacagcattaacaagagtaataaatgattatgctaag
aagtttggctatttaaaagaaaatgataagaatttatcaggggaagatataagagaaggg
cttacagcagtagtttctgttaaacttacggaacctcagtttgaagggcaaacaaaaact
aagcttggaaatactgaagtaagaggtatagttgatagtataataagcgaaagagtaagt
aattatcttgaagaaaatcctcaaataggtaaactcgttattgataaagctttagttgca
tcaagagcaagagaagcagccaaaaaagcaagagaaataactagaagaaaatctgtactt
gaaagtacttcacttccaggaaaattagctgattgttcgtcaaaagatgcagaggaatgt
gagatatatattgtcgagggagattcagctggtggttctgccaaacaaggtagaaacagg
cagttccaagctattttaccacttagaggtaaaataatgaatgttgaaaagcagagaata
gataaaatacttaattcagaggaaataaaggctatggcaacagcttttggcgggggaata
ggtaaagactttgatgtatctaaattgagatatcataagattataattatgacagatgcc
gatgttgatggggcacatataagaacgcttatacttacatttttctataggtatatgaca
gaacttatatcagagggtcatgtatttatagcacagccaccactatacaaggtaagtaag
gctagaaaagaatattatgcttatagtgataaagagttagatgatgtattacagaatgtt
ggtggtaaagataagagcaccgatattcaaagatacaaaggtctaggagaaatgaatcct
gaacagttatgggagactactatgaatcctgatcaaagaacgttaataaaggttaacata
gaggatgctatggcagcagatgaaattttcacaattcttatgggtgataaagtcgatcca
agaagaaaattcatagaagaaaatgctactaaagttgttaaccttgatatttaa |