KEGG   Clostridium felsineum DSM 794: CLFE_000980
Entry
CLFE_000980       CDS       T08216                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
cfb  Clostridium felsineum DSM 794
Brite
KEGG Orthology (KO) [BR:cfb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfb03032]
    CLFE_000980 (gyrB)
   03400 DNA repair and recombination proteins [BR:cfb03400]
    CLFE_000980 (gyrB)
Enzymes [BR:cfb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CLFE_000980 (gyrB)
DNA replication proteins [BR:cfb03032]
 Prokaryotic type
  DNA Topoisomerases
   CLFE_000980 (gyrB)
DNA repair and recombination proteins [BR:cfb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CLFE_000980 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: URZ14114
LinkDB
Position
complement(98536..100449)
AA seq 637 aa
MSEKNEIYDESQIQVLEGLEAVRKRPGMYIGSTGTRGLHHLVYEIVDNSIDEALAGYCSH
IKVIVHKDNSVTVSDDGRGMPVGIHHKMKKPTVEVIMTILHAGGKFGGGAYRVSGGLHGV
GASVVNALSETCEVEVKTEGHIWKQTYHRGKVASPFEKIGDSQDHGTRIYFKPDPEIFED
IEYDYDTLSQRLRELAFLNKGIKIQLTDERNDKNELFHYEGGLKSFVSYLNRNKEVVFKE
PIYVEGSTGGNYSVEIALQYNDGYNESIFSFANNIHTIEGGTHLAGFKTALTRVINDYAK
KFGYLKENDKNLSGEDIREGLTAVVSVKLTEPQFEGQTKTKLGNTEVRGIVDSIISERVS
NYLEENPQIGKLVIDKALVASRAREAAKKAREITRRKSVLESTSLPGKLADCSSKDAEEC
EIYIVEGDSAGGSAKQGRNRQFQAILPLRGKIMNVEKQRIDKILNSEEIKAMATAFGGGI
GKDFDVSKLRYHKIIIMTDADVDGAHIRTLILTFFYRYMTELISEGHVFIAQPPLYKVSK
ARKEYYAYSDKELDDVLQNVGGKDKSTDIQRYKGLGEMNPEQLWETTMNPDQRTLIKVNI
EDAMAADEIFTILMGDKVDPRRKFIEENATKVVNLDI
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgtcagaaaaaaatgaaatttatgatgaaagtcaaatacaggttcttgaaggtcttgaa
gctgtaagaaaaagaccaggaatgtacataggaagtactggtacgcggggcttacatcat
cttgtatatgagatagttgataatagtatagatgaagctttagccggatattgcagccat
ataaaagttattgtacataaagataattcagtaacagtatccgatgatggtagaggtatg
cctgtaggaatacaccataaaatgaaaaagccaactgtagaagtaataatgactatactt
catgcaggaggaaaatttggaggtggagcttacagagtatcaggaggacttcatggagtt
ggtgcgtctgttgttaatgcactatctgaaacttgtgaggttgaagtaaagacagaaggg
catatatggaaacaaacatatcataggggtaaggtggcatcaccttttgaaaaaataggt
gatagtcaagatcatggaacaagaatatattttaagccagaccctgaaatattcgaagat
atagaatatgattatgacactttatcacaaagattaagggaattggcatttttaaacaaa
ggaataaaaatccaacttactgatgagagaaatgacaaaaatgagcttttccattatgaa
ggcggcttaaagtcatttgtgtcatatttaaacagaaataaagaagttgtttttaaagag
ccaatttatgtagaaggttcaacaggtggtaattattctgttgagatagcacttcaatac
aatgatggatataacgaaagtatattttcttttgcaaataatatacacacaattgaaggt
ggaacacatcttgctggatttaaaacagcattaacaagagtaataaatgattatgctaag
aagtttggctatttaaaagaaaatgataagaatttatcaggggaagatataagagaaggg
cttacagcagtagtttctgttaaacttacggaacctcagtttgaagggcaaacaaaaact
aagcttggaaatactgaagtaagaggtatagttgatagtataataagcgaaagagtaagt
aattatcttgaagaaaatcctcaaataggtaaactcgttattgataaagctttagttgca
tcaagagcaagagaagcagccaaaaaagcaagagaaataactagaagaaaatctgtactt
gaaagtacttcacttccaggaaaattagctgattgttcgtcaaaagatgcagaggaatgt
gagatatatattgtcgagggagattcagctggtggttctgccaaacaaggtagaaacagg
cagttccaagctattttaccacttagaggtaaaataatgaatgttgaaaagcagagaata
gataaaatacttaattcagaggaaataaaggctatggcaacagcttttggcgggggaata
ggtaaagactttgatgtatctaaattgagatatcataagattataattatgacagatgcc
gatgttgatggggcacatataagaacgcttatacttacatttttctataggtatatgaca
gaacttatatcagagggtcatgtatttatagcacagccaccactatacaaggtaagtaag
gctagaaaagaatattatgcttatagtgataaagagttagatgatgtattacagaatgtt
ggtggtaaagataagagcaccgatattcaaagatacaaaggtctaggagaaatgaatcct
gaacagttatgggagactactatgaatcctgatcaaagaacgttaataaaggttaacata
gaggatgctatggcagcagatgaaattttcacaattcttatgggtgataaagtcgatcca
agaagaaaattcatagaagaaaatgctactaaagttgttaaccttgatatttaa

DBGET integrated database retrieval system