Clostridium felsineum DSM 794: CLFE_006860
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Entry
CLFE_006860 CDS
T08216
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
cfb
Clostridium felsineum DSM 794
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfb03032
]
CLFE_006860 (hup)
03036 Chromosome and associated proteins [BR:
cfb03036
]
CLFE_006860 (hup)
03400 DNA repair and recombination proteins [BR:
cfb03400
]
CLFE_006860 (hup)
DNA replication proteins [BR:
cfb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CLFE_006860 (hup)
Chromosome and associated proteins [BR:
cfb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CLFE_006860 (hup)
DNA repair and recombination proteins [BR:
cfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CLFE_006860 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Peptidase_C80
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
URZ14688
LinkDB
All DBs
Position
737554..737829
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AA seq
91 aa
AA seq
DB search
MNKAELITSISEKSKLTKKDAEVALKAFIESVEETLEKHEKVQLVGFGTFETRERAERKG
RNPRSKEEIVIPASTVPVFKAGKEFKERVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaggctgaattaatcactagtatatcagaaaaaagtaaattaacaaaaaaagat
gcagaagttgcattaaaggcatttatagaaagtgttgaagaaactttagagaaacatgaa
aaagttcaattagtaggtttcggtacttttgaaacaagagaaagagcagaaagaaaagga
agaaatcctagatctaaagaagagatagtaataccagcttctactgttccagttttcaaa
gcaggaaaagaatttaaggaaagagttaataagtaa
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