Clostridium felsineum DSM 794: CLFE_007300
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Entry
CLFE_007300 CDS
T08216
Symbol
appA_1
Name
(GenBank) Oligopeptide-binding protein AppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLFE_007300 (appA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfb02000
]
CLFE_007300 (appA_1)
Transporters [BR:
cfb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CLFE_007300 (appA_1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
URZ14719
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All DBs
Position
complement(776700..778406)
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AA seq
568 aa
AA seq
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MRKKFITVLIPSLIIASILSSCSSKSNINNAAKATKVSSVKDQYITAKSPNKNPKKAVEH
KDTFISAISEPGGVFLPYFYDNGWDGNATEPIFPSLVGTDEKGNPIADLAKTWDISSDNL
TYTYHLRKDLKFSDGSPLTADDVAFTLTLLDDPSYNGSFDISTCYIKGSDDYKKGSSTSI
SGIQVVDPLTIKITTEKVNPLNLTKLGGQVLSKAYYGKDYQKGKLDYLKALYSKPLGAGP
YKLDKYIPGQEIRYKANETYYNGKPKIENLIFKVTSKDTNLQLFETGDVDYDSFSTDKDT
VDQIENLGFANIRISTVSDYGYVYMNNKKSYLKDKNVRQALIYGLDRQKIVDVAYKGYGE
VATVPTSPLVWSYNTDGVNKYKFDPEKAKKLLDADGWKLNSNGIREKNGQKLKLSYLTSK
NTDQTIPVAKENYKALGIDFEPEIMDFNTLVEKLNKGDYDLAAVRTSGLVDPNDSVEEFS
SKKASENVTGYYNSKVDDLISEGVSTLNVKKRKVIYQKLYKELSNDPPVILIDYRKSLRA
WNSRIKGLDTNNFAGVSSTNLSKLKIEN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaaaaaatttattactgtacttattccatctttaattattgcttcaattttatct
tcatgctcaagcaaatctaatataaacaatgctgctaaagctacaaaagtatctagtgtt
aaagatcaatatattacagccaaatcacctaataaaaaccctaaaaaagcagttgaacac
aaagacacctttatttctgcaataagtgagcctggcggagttttcttaccatatttttat
gataacggctgggatggtaatgctacagagcctattttcccttcattagtgggtacagat
gaaaaaggaaatcctattgccgacttagctaaaacgtgggatatatcctcggataattta
acctatacttatcatttaagaaaagatttaaaatttagcgatggctcaccactaactgcc
gatgatgttgcatttactttaacacttttagatgacccttcttataatggtagtttcgac
atatcaacttgctatataaaaggaagtgatgattataaaaaaggcagttcaacttctatt
tcaggaatacaagttgtagatccgcttacaataaaaatcacaactgaaaaagtaaatcct
ctaaacttaacaaaattaggtggtcaagtgctatcaaaggcttactatggaaaagactat
caaaaaggaaagctggattatttaaaagcattatactctaaaccactaggtgctggacca
tataaattagataaatatattcctggtcaagagatacgctacaaagcaaatgaaacctac
tataatggtaaacctaaaatagaaaatttaatctttaaggttactagcaaagacacaaat
cttcaactttttgaaactggagatgtagattacgattccttttctacagataaagataca
gtagaccaaattgaaaatttaggctttgccaatataagaatcagcactgttagcgactat
ggttatgtttatatgaataataaaaaatcatatctaaaagacaaaaatgttaggcaagct
cttatttatggtcttgatcgtcaaaaaattgttgatgtagcctataaaggttatggtgaa
gttgccacagtacctacttccccacttgtgtggtcttataatactgatggtgtcaataag
tataaattcgatccagaaaaagcaaaaaaattattagatgctgatggttggaagctcaat
tccaatggtatacgtgaaaaaaatggtcaaaagctgaaactttcttatttaacttcaaaa
aatacagatcaaacaattcccgtagccaaagaaaactataaagctttaggtattgatttt
gaacctgaaattatggatttcaacacattagttgaaaaattaaacaagggcgactatgat
ttagcagcagttcgtacaagtggccttgtagacccaaatgactctgttgaagaattttca
tctaaaaaagcgtctgaaaatgttactggatactataattcaaaagttgacgaccttatt
tcagaaggcgtaagtactttaaacgtgaaaaagcgtaaggtgatttatcaaaagctttat
aaagagctatcaaatgatcctcctgttatattaattgattatagaaaaagcttaagagct
tggaatagtagaattaaaggattagacactaataattttgctggagtttcttctactaat
ttatcaaaattaaaaatagaaaattaa
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