Clostridium felsineum DSM 794: CLFE_008150
Help
Entry
CLFE_008150 CDS
T08216
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLFE_008150 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfb03021
]
CLFE_008150 (rpoA)
03400 DNA repair and recombination proteins [BR:
cfb03400
]
CLFE_008150 (rpoA)
Enzymes [BR:
cfb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLFE_008150 (rpoA)
Transcription machinery [BR:
cfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLFE_008150 (rpoA)
DNA repair and recombination proteins [BR:
cfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLFE_008150 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
RAD51D_N
PASTA
Motif
Other DBs
NCBI-ProteinID:
URZ14802
LinkDB
All DBs
Position
852700..853647
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPKIECVESTEDGSYGRFVVEPLERGYGITLGNSLRRILLSSLPGVAANSVRIEG
VLHEFSTVKGVKEDVTELILNIKALCLKMEGEDSKVIYIDAHGPGEVTGADIRTDGSVEV
INKDLHIATLDDDGKLYMEIEVNRGRGYVTQNKNKRDDMPIGTIAVDSIYSPIKRVNFTV
ENTRVAQITDYDKLTIEVWGNGTIRPEEAISLAAKILIEHFKLFMTLTDHADDMEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQRSMEDMMKVRNLGRKSLEEVE
QKLKALGLSLKLNDE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaatagaaaaacctaaaatagaatgtgttgagtctacagaagatggttcctac
ggcagatttgttgtagaacctcttgaaagaggatatggaattacccttggtaattcattg
agaagaatacttctttcatcattaccaggagttgctgctaattcagtaagaattgaggga
gtacttcatgagttttcaactgttaaaggagtaaaagaagacgttacagaattgatactt
aacattaaagcgttatgcctcaaaatggaaggtgaagattctaaggtaatatatatagat
gcacatggacctggagaggttacaggtgcagatataagaactgatggatcggtagaagtt
ataaacaaagatttacatatagcaactctcgatgatgatggaaagttatatatggaaatt
gaagttaatagaggcagaggttatgttactcagaataaaaataaaagagatgacatgccg
ataggaacaatagcagttgattcaatatattctccaatcaaaagagtaaatttcactgtt
gaaaatacaagagttgctcaaataactgattacgacaaactaaccatagaagtatggggc
aatggtactataagaccagaggaagcaattagtttggcagcaaaaatacttatagagcat
tttaaactatttatgactcttacagatcatgcagatgatatggagataatggtagaaaaa
gaagaagataagaaagagaaagtcttagaaatgactattgaagagcttgatctttcagtt
agaagttacaattgcttaaagagagcaggaataaacactgttcaagaattaactcaaaga
tccatggaagatatgatgaaagtcagaaatcttggaagaaaatctttagaagaagttgaa
cagaaacttaaagctttaggattatcattaaagttaaatgatgaatag
DBGET
integrated database retrieval system
