Clostridium felsineum DSM 794: CLFE_010610
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Entry
CLFE_010610 CDS
T08216
Symbol
recD2_2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLFE_010610 (recD2_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfb03400
]
CLFE_010610 (recD2_2)
Enzymes [BR:
cfb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CLFE_010610 (recD2_2)
DNA repair and recombination proteins [BR:
cfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLFE_010610 (recD2_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HHH_RecD2
AAA_19
AAA_30
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
PhoH
PIF1
SLFN-g3_helicase
AAA_23
AAA_28
UvrD_C
nSTAND3
AAA_22
UvrD-helicase
AAA
DNA_pol_lambd_f
HHH_2
SMC_N
DUF575
SAM_SMF
ORC-CDC6-like
HerA_C
DUF6452
AAA_29
AAA_16
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
URZ15044
LinkDB
All DBs
Position
1097272..1099485
Genome browser
AA seq
737 aa
AA seq
DB search
MLELHCVVDTVVFKNEENGYVVANAKPKEEDKITIVGCIPYVMEGQSLKVSGEWIVHPQF
GKQFKIERCEEILPNSLLGIEKYLASGIIAGIGPVTAQKIVNKFGEQTLEILDNDIYRLS
EIEGIGKKKIDKIYETYSEQREVRNIMIFLQNYGVTPKQCVKIYNHYKAKAIEVVKQNPY
ILVEEISGIGFKTADKIARSLGIEGNSPFRIQSGVSYVINEFCMLGNTYMPMEKLIKNCM
EVLNVKKDEVEKAVYECTLSQRIKVEIINGENCVFTMEYYYCEIGITRKIVTLAYDSYKS
LDINVDEKIKQFENENGIKFAPSQIEAIEGAFLNGIEVITGGPGTGKTTIIRCITYIFEE
LNMKVFMAAPTGRAAKRMSESTGREAKTIHRLLEIGYEDEVFLDNNNDSTLQCDVVIIDE
ASMIDIVLMNSLLKSIGMGTRVIIVGDVDQLPSVGPGNVLRDIIESKCVKVVRLADIFRQ
SKESMIIVNAHKINNGEMPLLNRKDKDFYFIKEDNAEGITNTIISLVYERLPKFNKKWNA
VRDIQVLSPMKRGSAGVINLNTNLQSIINPPHKNKPEIKFRDNIFRVGDKVMQIKNNYML
KWNRITGEGEKSGEGVFNGDIGVVNDIDEDNNVIVIFDDEKEVTYERINLDELELAYAVT
IHKSQGSEFPVVILPMTMGPPLLMNRNLLYTGITRAKQLVVIVGFPKAIKFMIDNDKSFE
RYSGLKWRIEDIIKEES
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacttcattgtgttgtcgacactgttgtgtttaaaaatgaagagaatgggtat
gtagttgctaatgccaagccaaaagaagaggataaaattacaatagttgggtgtataccc
tatgttatggaagggcaatctttaaaggtttcaggagaatggattgttcatcctcagttt
ggaaaacagtttaaaatagaacgttgtgaggaaattttacccaattctttattaggtata
gaaaaatatctagcatcaggaattattgctggaataggaccagtaacagcccaaaaaata
gtaaacaaatttggagaacaaacgcttgaaatattagataatgatatatatagattaagt
gaaatagagggaataggtaaaaagaaaatagataagatatatgagacttattctgaacaa
agagaagtaagaaatataatgatttttcttcaaaattatggagtgacgcccaaacaatgt
gtaaaaatatataatcattataaagcaaaggctatagaagtagtgaaacaaaatccatat
atacttgttgaagaaatatctggaataggatttaaaacagcagataaaatagctagaagt
cttggaatagaaggaaattctccatttagaattcaaagtggtgtatcttatgtgataaat
gaattttgtatgttaggtaacacatatatgccaatggaaaagcttataaaaaattgcatg
gaagtactaaatgtaaaaaaagatgaagtagaaaaagcagtatatgaatgtacactttct
caaagaataaaagtggaaataataaatggcgaaaattgcgtttttactatggaatattat
tattgtgaaataggtataacaagaaaaatagtaacacttgcttatgacagttataaaagt
ctagatataaatgtagatgaaaaaataaaacaatttgaaaatgaaaatggaataaagttt
gcaccatctcaaattgaagctattgagggagcgtttttaaacggaatagaagttataaca
ggaggtcctggaactggaaaaacaacgataataagatgtataacgtatatatttgaagaa
ttaaacatgaaggtatttatggctgcaccgacaggaagagccgcaaaaagaatgtccgaa
tcaacaggtagggaagctaaaactattcataggttactggagattggttatgaagatgag
gtgtttctagataacaataatgacagtacacttcaatgtgatgttgtaataatagatgaa
gcatcaatgattgatattgtcttgatgaatagtcttttaaaatcaataggtatgggaact
agggttataatagttggagatgtagatcaacttccatctgttggaccaggaaatgttctt
agagatataattgagagtaaatgtgtaaaagttgttagattagcagatatatttagacaa
tctaaggagagtatgattatagtaaatgctcataaaattaacaatggtgaaatgccactt
ttgaataggaaggataaggatttttattttataaaagaagataatgcagaaggtataact
aatactataattagtttagtatatgaaaggcttcctaagtttaataagaaatggaatgct
gtaagagacatacaagtactttcgcccatgaaaagaggtagtgcaggggtaataaattta
aatactaatttacagagcattataaatccacctcataaaaataaacctgaaattaaattt
cgtgacaatatttttagggttggagacaaagttatgcagataaagaataactatatgtta
aagtggaataggataacaggcgaaggggaaaagtctggagaaggagtttttaatggagat
ataggagttgtcaatgatatagatgaagataataatgttatagttatttttgatgatgaa
aaagaagttacatatgaaagaattaatttagatgaattagaacttgcatatgcagtaacc
attcacaaaagccaaggaagtgaatttccagtagtaattcttccaatgacaatgggacca
cccctacttatgaatagaaatcttttgtatactggaattacaagagctaagcagttagtt
gtaatagttgggtttcctaaagctattaaatttatgatagataatgataaaagctttgaa
agatattcaggacttaaatggagaattgaagatataataaaagaagagagttag
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