Clostridium felsineum DSM 794: CLFE_013080
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Entry
CLFE_013080 CDS
T08216
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLFE_013080 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfb03019
]
CLFE_013080 (groL)
03110 Chaperones and folding catalysts [BR:
cfb03110
]
CLFE_013080 (groL)
03029 Mitochondrial biogenesis [BR:
cfb03029
]
CLFE_013080 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfb04147
]
CLFE_013080 (groL)
Enzymes [BR:
cfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CLFE_013080 (groL)
Messenger RNA biogenesis [BR:
cfb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CLFE_013080 (groL)
Chaperones and folding catalysts [BR:
cfb03110
]
Heat shock proteins
HSP60 / Chaperonin
CLFE_013080 (groL)
Mitochondrial biogenesis [BR:
cfb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CLFE_013080 (groL)
Exosome [BR:
cfb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CLFE_013080 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CLFE_013080 (groL)
Exosomal proteins of breast cancer cells
CLFE_013080 (groL)
Exosomal proteins of colorectal cancer cells
CLFE_013080 (groL)
Exosomal proteins of bladder cancer cells
CLFE_013080 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Toprim
Motif
Other DBs
NCBI-ProteinID:
URZ15290
LinkDB
All DBs
Position
1396548..1398179
Genome browser
AA seq
543 aa
AA seq
DB search
MAKQILYGEEARRAMQKGVDKLANTVKVTLGPKGRNVVLDKKFGSPLITNDGVSIAKEIE
LEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRSGIR
LAVEKTVEGLKGISKNVNGKEDIARVASISAADPEIGKLIADAMEKVGNEGVITVEESKS
MGTELDVVEGMQFDRGYLSPYMVTDQEKMEAVLDDPYILITDKKISNIQEILPLLEQIVQ
QGKKLLIIADDVEGEALATLVVNKLRGTFNCVAVKAPGFGDRRKDMLRDIAILTGGEVIS
EELGKDLKDVKVEDLGSAESIKISKENTTVVNGRGDKNAIHDRVAQIRGQIEETTSDFDR
EKLQERLAKLAGGVAVIKVGAASETELKERKMRIEDALAATKAAVEEGIIAGGGTAYINV
LPEVKELTSEDPDIQVGINIIIKALEEPVRQIAANAGLEGSVIIEKIIKSDKGIGFDALH
EKYVDMLNVGIVDPTKVTRSALQNAASVASTFLTTECAVADIPEKEKPEMPGGAPGMGMG
GMY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaaatattatacggagaagaagcaagaagagctatgcaaaaaggtgtagat
aagcttgcaaatactgttaaggttactcttggaccaaaaggaagaaatgttgttttagat
aaaaaatttggctcaccacttataacaaatgatggagtaagtatagcaaaggaaatagaa
cttgaagatccatatgaaaatatgggagcacaacttgttaaagaagttgcaacaaaaact
aatgatgtagcaggagacggaactactacagcaacacttcttgcacaagcaataataaga
gaaggattaaaaaatgttacagctggagctaatccaatgcttataagaagcggaataaga
cttgctgtagaaaaaacagttgaaggacttaaaggaatatcaaaaaatgttaatggaaaa
gaagatatagcaagagttgcttcaatttcagcagcagatcctgaaataggaaaattaata
gcagatgctatggaaaaagtaggcaacgaaggtgttataactgttgaagaatcaaaatca
atgggtacagagcttgatgttgttgaaggtatgcaatttgatagaggatatttaagtcca
tatatggtaacagatcaagaaaagatggaagctgtacttgatgatccatatatattaata
acagataagaaaatatcaaatatacaagaaattcttccacttcttgagcaaatagttcaa
caaggtaagaaattacttataatagctgatgatgttgaaggagaagctttagctacatta
gttgttaataaattaagaggaacatttaactgtgttgctgttaaagcaccaggttttggt
gatagaagaaaagatatgttaagagatatagcaattcttacaggtggagaagttatatct
gaagaacttggaaaagatcttaaggatgtaaaagttgaggatcttggaagtgctgaaagc
attaaaatatctaaagaaaacactacagttgtaaatggaagaggcgacaagaacgcaatc
cacgacagagttgctcaaataagaggtcaaatagaagaaactacttctgattttgataga
gaaaaattacaagaaagattagcaaaacttgctggtggagttgcagttataaaagttgga
gctgcttcagaaactgaattaaaagaaagaaaaatgagaattgaagatgcgcttgcagct
acaaaagcagctgttgaagaaggtataattgctggtggtggtactgcatatattaatgta
ttaccagaagtaaaagaattaacttctgaagacccagatattcaagttggtataaatata
ataattaaagcacttgaagaaccagtaagacaaatagctgcaaatgcaggacttgaaggt
tcagtaattatagagaaaataataaaaagtgataaaggcattggatttgatgcattacat
gaaaaatatgttgatatgttaaatgtaggaattgttgatccaactaaggttacaagatca
gcacttcaaaatgctgcatcagtagcttcaacattccttacaacagaatgtgcagtagca
gatattcctgagaaagaaaagcctgaaatgccaggtggagcaccaggaatgggaatgggc
ggaatgtactaa
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