Clostridium felsineum DSM 794: CLFE_015110
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Entry
CLFE_015110 CDS
T08216
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb03420
Nucleotide excision repair
cfb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLFE_015110 (pcrA_2)
03430 Mismatch repair
CLFE_015110 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfb03400
]
CLFE_015110 (pcrA_2)
Enzymes [BR:
cfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLFE_015110 (pcrA_2)
DNA repair and recombination proteins [BR:
cfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLFE_015110 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
CLFE_015110 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AcMNPV_Ac75
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
URZ15471
LinkDB
All DBs
Position
1590668..1592572
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AA seq
634 aa
AA seq
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MINEKELLKGLDIDQKEAVTAPLDKPACVRANAGSGKTRVLSSRVAYLVLKKVSGIMLLT
FTNKAAKEMTERVQKLVGDNISTRIISGTFHHMACIFLRRYSKAVGIDNKFSILSQSDAE
SIISRTRKEVLSEIPKNEVPKDFPTAPKIMSKYSFYRNKFKDITFDAFLRNINIMPKSRQ
LIENIIEEYEIFKKESNSLDFDDLIIYFRKLILSYIKVRQSIHSAYPYILCDEYQDVNYI
QKDIIDMLDMNNTQMVVGDEGQSIYGWRGSNINYILNFKENYKNALIYTIRYNYRSGSGI
VKLAENAINLNVEKEENKKIMIPFQKQKVIPVIKGFIDEVEQGNVIANQILSEKYNFGET
AVLVRSNRLTRDLEFAFRKSHIRYKVVGGNPFYEKAHIKDLFAFLKFEYNRKDRISFIRI
ITMANGVGAKTAEKIYETFGRCNFNYEFIRTLKVPKKSKNDVENIFNIMEESENIKFTAE
KLQYICESFYENYLYDEYNDESIENRLNDVRKFIEMAEEYLTIDRFIEDLILDNKNDDDD
KSDVVTISTVHRAKGLEWDNVFLPYLNDDIFPSKMSTTIEELREEQRLFYVAITRAKKNL
FISYVNAFTDDPKQNIQYSSEFIKQLDGRLFVAE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgattaacgaaaaagaattgctaaaaggattagatattgaccagaaagaagctgtaacg
gctccattagataagccagcttgtgtaagagcaaatgcaggtagtggaaaaacaagggta
ctttcatcaagagttgcatatttggttttaaagaaagttagtggcattatgcttttaact
tttactaataaggcagctaaggaaatgacagaaagagttcaaaaattagtaggagataat
ataagtactagaataatatcaggaacttttcatcatatggcttgtatattcttaagaagg
tattctaaggcagttggcatagataataaatttagcatacttagccaatcagatgcagag
tctattataagtagaacacgcaaagaggtactctctgaaatacctaaaaatgaagttcct
aaagattttcctacagctccaaagataatgtcaaagtattctttctatagaaataaattt
aaggatataacatttgatgcttttttaagaaatattaatattatgcccaaaagtagacaa
cttatagaaaatataattgaggaatatgaaatatttaaaaaagaatctaactcactggat
tttgatgatttgattatatattttagaaaactgatcttaagttatataaaagtgaggcaa
tcaatacattctgcttatccatatattttatgtgacgagtaccaggatgtaaattatatt
cagaaagatattattgatatgctggatatgaataatactcaaatggtggttggtgatgaa
ggacagagtatatatggatggcgtggaagtaacataaactacattttgaattttaaggaa
aattataaaaatgctttgatatatactataagatacaattatagaagtggttcaggaata
gtaaaacttgctgaaaatgctataaaccttaatgttgaaaaagaagaaaacaaaaagatt
atgataccatttcaaaaacagaaggtaattccagtgataaaaggttttatagatgaagta
gaacaagggaatgtcatagcaaaccaaatactaagtgaaaaatataattttggagaaaca
gcggtacttgttagaagtaatagactcacacgagatttagaatttgcttttagaaaaagt
catataagatataaagttgttggaggtaatcctttttatgaaaaggctcatattaaagat
ttatttgcgtttttaaagtttgaatacaataggaaggatagaatatcatttataagaatt
attactatggcaaatggtgtaggggctaagacagcagagaagatatatgaaacttttgga
agatgcaattttaattatgagtttatcagaacccttaaagtccctaaaaaatcaaagaat
gatgttgaaaatatatttaatatcatggaagaaagcgagaatattaagtttacagcagag
aaattacaatatatatgtgagagcttttatgaaaactatttatatgacgaatataatgat
gaaagtattgaaaatagattaaatgatgttagaaagtttatagagatggcagaggaatat
ttaacaatagatagattcatagaagatttaatactagataacaaaaatgatgatgatgat
aagtcagatgtagtaactatttctactgtgcatagggctaagggcttagagtgggataat
gtatttttaccatacctaaatgatgatatatttccatctaagatgagtacaactatagaa
gaactacgagaagaacaaaggttattttatgtcgcaataactagagcaaaaaagaatctt
tttatttcatatgttaatgcttttacagatgatcctaagcaaaatatacagtattcgtct
gaatttataaaacagctagatgggaggttgtttgttgcggaatag
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