Clostridium felsineum DSM 794: CLFE_017450
Help
Entry
CLFE_017450 CDS
T08216
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb03030
DNA replication
cfb03410
Base excision repair
cfb03420
Nucleotide excision repair
cfb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLFE_017450 (polA)
03410 Base excision repair
CLFE_017450 (polA)
03420 Nucleotide excision repair
CLFE_017450 (polA)
03440 Homologous recombination
CLFE_017450 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfb03032
]
CLFE_017450 (polA)
03400 DNA repair and recombination proteins [BR:
cfb03400
]
CLFE_017450 (polA)
Enzymes [BR:
cfb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLFE_017450 (polA)
DNA replication proteins [BR:
cfb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CLFE_017450 (polA)
DNA repair and recombination proteins [BR:
cfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CLFE_017450 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLFE_017450 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
DprA_N
YbaB_DNA_bd
Motif
Other DBs
NCBI-ProteinID:
URZ15699
LinkDB
All DBs
Position
1856044..1858659
Genome browser
AA seq
871 aa
AA seq
DB search
MERLLVLDGNSLMNRAFYALPELTNTDGLHTNGIYGFMTMLIKMRDEIKPDFIVTTFDRK
APTFRHKEYEDYKAGRKKMPPELSEQFPVLKELLEKLAINIFEIDGFEADDLIGTLACFA
KERGIEVYIVTGDRDALQLADDNVKVVINKKGMTEKEIYDKNRMIEEYGVTPLQFIDVKG
LMGDNSDNIPGVPGIGPKTAFKLIQEYGSLENVLDNIEKLKGKKVKENLETYREQAVFSK
KLATIMTNVPIEIDIEEIRSKENFDVDGARQLLRRLQFKSIIEKIPKLNVPEEKNEVNVE
YTLIDEALRFHSVFSAIKNTEVYMTYNIGGESLYSEIYIDKIFIKANGEAYIVDVNKMME
DDKENTIFYLKSFFQDRSVTKIIHDSKNMLTVLTKLNINIEKMVFDTAIAEYLINPSKKE
YNLKDAAEDLLLLDLTGEDNDIKIKEVYVMDKIYNKLKDKIKDYDMEELYYKVELPLIEV
LSSMESCGFKVEKNKLEQIGEKFNGEIAKVKEEIYNMSGEEFNISSPKQLGKILFEKLDL
PVVKKTKTGYSTNAEVLEKLIDKHPIIEKVVYYRQLTKLYSTYVEGLKTVIDADDKIHSS
FNQTVTTTGRLSSTEPNLQNIPIKSEMGREIRKVFVPDNDECVILSADYSQIELRVLAHI
ADDENLINAFKHHSDIHTKTASEVFRVPISDVTPRMRSNAKAVNFGIVYGISDFSLAKDI
KVSKKEAKEYIDTYFERYPNVKKYLDDIIVTAKKSMYVSTIMNRRRIIPEIASSNKIIKG
FGERLAMNTPIQGSAADLIKLSMVNVYRKIKELKLKSSLILQVHDELILNVYMDELEKVK
ELVKSEMEKVMELKVPLEVDIESGKTWYEAK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattgcttgtgctagacggtaatagccttatgaatagggctttttatgcactg
ccagagcttacaaatacagatggacttcatactaatggaatatatggatttatgacaatg
cttataaaaatgagggatgaaataaaacctgattttatagtcacaacttttgatagaaaa
gcacctacttttagacataaggaatatgaagattataaagctggaagaaaaaaaatgccg
ccagaacttagcgagcagtttcctgttttaaaagaattacttgaaaagttagctataaat
atatttgaaatagatggatttgaagcagatgaccttataggaactttggcctgctttgct
aaagaaagaggaatagaagtatacatagttacaggagatagagatgcacttcagcttgcg
gatgataatgttaaagttgttataaataaaaaaggcatgactgaaaaggaaatatacgac
aaaaatagaatgattgaagagtatggagtaactccgcttcaatttatagatgtaaaaggt
cttatgggagataattctgataatataccaggagttcctggaataggtcctaaaactgca
tttaaacttatacaagaatacggaagtttggagaatgttcttgataatatagaaaaatta
aagggcaaaaaggtaaaagaaaatttagaaacttatagagagcaggctgtttttagtaaa
aagcttgcaacaataatgacaaatgtgcctattgaaattgacattgaagaaataagatct
aaagaaaactttgatgttgatggagcaagacagcttttaagaaggcttcaatttaaaagt
ataattgaaaaaataccaaaacttaatgtgccagaagaaaaaaacgaagttaacgtagaa
tatactttgatagatgaagctttaaggttccattcagtattttcagctattaaaaatact
gaagtatatatgacatataatatcggaggagaaagtttatattcggaaatttatattgac
aagattttcattaaagcaaatggagaagcatatatagtagatgtaaataaaatgatggaa
gatgataaagaaaatacaatattttatttaaaatcatttttccaagatagaagtgtcaca
aaaataatacatgattctaaaaatatgctcacagtccttacaaagcttaatataaatata
gaaaaaatggtatttgatacggcaatagcagaatacctaataaatccatctaaaaaggag
tacaatttaaaagatgcagcagaagatctacttttattggatttgactggagaagataat
gatattaaaataaaagaagtttatgtcatggataaaatttacaataagcttaaagacaaa
attaaagattatgacatggaagaattgtattacaaagtggagcttccgcttatagaagtg
ttgtcatctatggagagctgtggatttaaggttgagaaaaataagcttgagcaaattggt
gagaaatttaatggagaaatagcgaaggttaaagaagaaatatataatatgtcaggagaa
gaatttaatataagttctccaaagcagctaggtaagatactttttgaaaaattggatttg
cctgttgtaaagaaaacaaaaacaggatattcaactaacgctgaagttttagaaaaatta
atagataaacatcctataattgaaaaggttgtgtattatagacagcttacaaagctttat
tcaacatatgtagaggggcttaaaacagttatagatgcagatgataaaatacattcaagt
tttaatcaaacagtaactacaacaggaagactttctagtacagagcccaatcttcagaat
atacctataaaaagtgaaatgggcagagaaataagaaaggtttttgtaccggataatgat
gaatgtgtaatattatcagctgattattcacaaatagagttaagagttttagcacatatt
gccgatgatgaaaatttaataaatgcctttaagcatcacagtgatatacatactaaaaca
gcatcagaagtattcagagtacctattagtgacgttactcctagaatgagaagtaacgct
aaagctgtaaattttggaattgtatatggcataagtgattttagtttggcaaaagacata
aaagtatcaaagaaagaagcgaaagagtatattgatacttattttgaaagatatcccaat
gtaaaaaaatatttagatgatataatagttacagctaaaaaaagtatgtatgtaagtacc
ataatgaatagaagaagaattattccagaaatagcctcatcaaataaaatcattaagggg
tttggagaaagacttgctatgaacactccaatacaaggaagtgctgcggatcttattaag
ctttcaatggtcaatgtgtatagaaaaattaaagaattaaagcttaaaagtagtcttata
cttcaggttcacgatgagcttattttaaatgtttatatggatgaacttgaaaaggtaaaa
gaactggtaaaaagtgaaatggaaaaagtcatggagcttaaggttcctttagaagtagat
atagagtcaggtaagacctggtatgaagcaaaataa
DBGET
integrated database retrieval system
