Clostridium felsineum DSM 794: CLFE_018190
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Entry
CLFE_018190 CDS
T08216
Symbol
sigA_1
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CLFE_018190 (sigA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfb03021
]
CLFE_018190 (sigA_1)
Transcription machinery [BR:
cfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CLFE_018190 (sigA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HTH_PafC
Exonuc_VII_L
Gln-synt_C
PRTRC_E
DUF2017
DUF4681
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
URZ15772
LinkDB
All DBs
Position
1934746..1935882
Genome browser
AA seq
378 aa
AA seq
DB search
MKNKTEVKNGGEKKNSKKVSKEETAKEKNEKMKIVKNLIDKGKKNGSLTYKEIMDELQEV
DLGPEQIEKIYEVLESVGVDVVGDMHEIEVEEEELDLTIPEGIAIDDPVRMYLKEIGKVP
LLSPEEEIDLAQRIENGDRTARKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIK
AVEKFDFKKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQEL
GREPQPEEIAKIMDMPVDKVREIMKIAQEPVSLETPIGEEEDSHLGDFIPDDEAPAPADA
AAFRMLKEQLLKILNTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKA
LRKLRHPSRSKKLKDYLD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataagactgaagttaaaaacgggggagaaaagaaaaactcaaaaaaggtgtca
aaagaagaaaccgcaaaagaaaaaaatgaaaaaatgaaaattgtcaaaaatctaatagat
aaaggcaagaaaaatggtagcttaacgtataaagaaataatggatgaacttcaggaagtt
gacctaggtccagaacagatagaaaagatatatgaagttcttgaatctgttggtgttgac
gtagttggtgacatgcatgaaatagaagtggaagaagaagagttagatttaactatacct
gagggaatagcgatagatgaccctgtaagaatgtatttaaaagaaattggtaaagttcca
ctattatccccagaagaagaaatagacttagctcaaagaattgaaaatggtgatagaaca
gcaagaaagaaacttgcagaagcaaacttaagactcgttgtaagtattgcaaagagatat
gttggaagaggaatgcttttccttgatctaattcaagaaggaaatctagggcttattaaa
gcagtagaaaagtttgactttaaaaaaggttacaaatttagtacctatgctacttggtgg
attaggcaggcaataacaagggccatagcagatcaagcaaggactataagaataccagta
cacatggttgaaaccataaataagcttataagagtttcaagacaattacttcaggaatta
ggtagagaacctcaaccagaagaaattgctaagataatggatatgccggttgataaggta
agagaaataatgaaaatagcacaagagcctgtatcccttgaaaccccaataggagaggaa
gaggatagtcatcttggtgattttattccagatgatgaagctccagcaccagcagatgcc
gcagcatttagaatgcttaaagagcaacttcttaaaatattaaatactttaacacctaga
gaagagaaagttctaagacttagatttggtctcgatgatggaagggctagaacccttgaa
gaggtaggaaaagagtttaatgttacgagagaaagaataagacaaatagaagctaaggct
cttagaaaattaagacatccaagcagaagtaaaaaattaaaagattatcttgattag
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