Clostridium felsineum DSM 794: CLFE_018690
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Entry
CLFE_018690 CDS
T08216
Symbol
ftsH_3
Name
(GenBank) ATP-dependent zinc metalloprotease FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CLFE_018690 (ftsH_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfb03019
]
CLFE_018690 (ftsH_3)
03009 Ribosome biogenesis [BR:
cfb03009
]
CLFE_018690 (ftsH_3)
04131 Membrane trafficking [BR:
cfb04131
]
CLFE_018690 (ftsH_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfb04147
]
CLFE_018690 (ftsH_3)
Messenger RNA biogenesis [BR:
cfb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CLFE_018690 (ftsH_3)
Ribosome biogenesis [BR:
cfb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CLFE_018690 (ftsH_3)
Membrane trafficking [BR:
cfb04131
]
SNARE
SNARE associated proteins
Others
CLFE_018690 (ftsH_3)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CLFE_018690 (ftsH_3)
Exosome [BR:
cfb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CLFE_018690 (ftsH_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_14
AAA_2
CDC48_N
RuvB_N
AAA_22
TIP49
AAA_33
AAA_28
AAA_5
nSTAND3
Sigma54_activat
Rad17
AAA_18
IstB_IS21
SKI
ABC_tran
TsaE
Zeta_toxin
RNA_helicase
CDC48_2
Mg_chelatase
Cytidylate_kin2
Sigma54_activ_2
AAA_lid_PRS2_C
AAA_17
ATPase_2
AAA_7
DUF815
NPHP3_N
AAA_24
Parvo_NS1
SLFN-g3_helicase
NB-ARC
DUF4503
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
URZ15822
LinkDB
All DBs
Position
1976218..1978401
Genome browser
AA seq
727 aa
AA seq
DB search
MNKSRELQIIETNSENSLGIVKVHPLDMFNLGCNNGDIIKLKATRNTIAKILSSTDCNEG
TIQIDNIMKQNIGSATNMYVEISKTSYSNAQSITLEPSADTKILFQTSSEKKNYIFNLLK
KFKNEPSQKQGEDIRKYQRLVDGMPVVKDNIIRIHLFGHFLTFKILETIPDTNVIITQST
QISIIGGAILKPQNNTISYDDIGGLSKEISKVKEMVELPLVYPKLFEQVGIDPPKGLLLY
GPPGCGKTLIARAVAQESGVYFINVNGPEIIQQHYGESEEKLRKIFEEAQENAPSIIFFD
EIDAIAPNRDTVLGDVEKRVVAQLLTLMDGLKNRGSIIVIGATNLPNNVDTALRRPGRFD
REIEINPPDKIGRLEILKIHTRAMPLDKDINLESIAEVTHGFIGADLAALCREAAMVCIR
EFLPKINFSNNEFSKQEIESIKIGLNHFEIALNEFELSATRQVSTEISEVKWEDVGGLEN
VKNTLHECIELPLKYSERFKLAKIKPPKGILLTGSSGTGKTLVARALATESEINFITVKG
PELLSKWVGESERSIREIFKKARQSAPSIIFFDEIDAILPSRGNGGSGSHIDEHIVGQFI
LEMDNIDELQGILVLAATNRPDLIDRALLRPGRFDLIIELPIPDYDTRLSILNIYCKTRH
LDPDISLDELAKRTNGMTGADLASLCHRTAMFAIKESIESHPENEFTDFSIKKSHFEAVL
SSIQKKL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagccgcgaacttcaaataatagaaacaaattctgaaaatagtcttgggatt
gtaaaagtacatccattagatatgtttaatctagggtgcaataatggtgatattattaaa
ttaaaagcaactcgaaatactattgcaaaaattttaagttcaactgattgtaatgaaggt
accatccaaattgacaatattatgaaacaaaatattggatctgccacaaatatgtatgtt
gaaatttcaaaaacttcatatagcaatgcacaaagtattacgttagaaccttctgctgat
acaaaaatcttatttcaaacaagttctgagaaaaaaaattatatatttaatttactaaaa
aaatttaaaaatgaaccatctcaaaaacaaggtgaagatattcgtaagtatcaacgtttg
gttgatggtatgcctgtagtcaaagacaatataatccgtattcatctttttggacatttt
ctaacttttaaaattttagaaaccattcctgatactaacgtaataattacacaatcaaca
caaatttcaattattggaggtgctattttaaaaccacaaaataataccatttcatatgat
gatattggaggattaagtaaagaaatttctaaagttaaagaaatggttgaattgccttta
gtatatccaaagttatttgaacaagttggtatagatccacctaaaggcttacttttatat
ggacctcctggttgtggaaaaacgcttattgcacgtgctgttgctcaggaatcaggtgtt
tattttattaatgtaaatggtcctgaaatcattcaacaacattatggtgaatctgaagaa
aaactaaggaaaatttttgaggaagcccaagaaaatgctccttcaattatattttttgat
gaaatcgatgctatagctccaaatagagatacagttcttggagatgtggaaaaaagagtt
gttgcacaacttcttactctcatggatggtcttaaaaaccgtggtagtattattgtaata
ggtgcaactaatctacctaataatgttgacactgcacttagacgtccaggtagatttgat
agagagatagaaattaatccgcctgataaaataggacgattagaaattttgaaaattcat
actcgagcaatgcctttagacaaagatataaatcttgaaagtatagctgaagtaactcat
ggctttataggtgcagatcttgcagcactatgtcgtgaagcggctatggtttgtattaga
gaattcttgcctaaaattaatttttctaataatgaattttcgaaacaagaaattgaatcc
attaaaataggactaaatcattttgaaattgcattaaatgaatttgaactttctgcaact
cgtcaggtttctactgaaatttctgaagttaaatgggaagatgtgggcggtcttgaaaat
gtaaaaaatactctacacgaatgtatagaattaccattaaaatatagtgagcgatttaaa
ttagcaaaaataaaaccaccaaaaggaattttattaactggatcttccggaactgggaaa
accctagttgctcgggcactcgcaactgaaagtgaaataaattttataacagtaaaaggc
ccagagcttctttcaaaatgggttggtgaatctgaacgaagcattcgtgaaatatttaaa
aaagctcggcaatctgcaccatctatcattttctttgatgaaattgatgctattcttcca
tcacgaggaaatggtggcagcggatcacatattgatgaacatattgtaggtcagtttatt
ttagaaatggataatatagatgaattacaaggtatattagttctagctgcaactaatcgt
ccagatctaatagatagagcattactcagacctggtcgttttgatttaattattgaatta
cctataccagattatgatacacgcctatctattttaaatatatattgtaaaacacggcat
cttgatcctgatatttctctagatgaattagccaaaagaacaaatgggatgacaggagca
gatttagctagtctctgtcatagaacagctatgtttgcaattaaagaatcaatagagagc
catcctgaaaatgagtttactgatttttcaataaaaaaatctcactttgaagctgtactg
agtagcatacaaaaaaaactttga
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