KEGG   Clostridium felsineum DSM 794: CLFE_020930
Entry
CLFE_020930       CDS       T08216                                 
Symbol
sigD
Name
(GenBank) RNA polymerase sigma-D factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
cfb  Clostridium felsineum DSM 794
Pathway
cfb02020  Two-component system
cfb02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cfb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CLFE_020930 (sigD)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CLFE_020930 (sigD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfb03021]
    CLFE_020930 (sigD)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:cfb02035]
    CLFE_020930 (sigD)
Transcription machinery [BR:cfb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CLFE_020930 (sigD)
Bacterial motility proteins [BR:cfb02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    CLFE_020930 (sigD)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 UPF0122 DUF1492 HTH_Tnp_4
Other DBs
NCBI-ProteinID: URZ16046
LinkDB
Position
2208780..2209505
AA seq 241 aa
MAIDGIVDDREAVIKKYIPLVKYIASRVIIGKSKYIEYEDLVGYGMIGLMDALKKFDHSK
GMKFSTYSSIRIKGAMIDELRKNSPISKGAMDKLNKYNLVVERLEKELCREPTELEIASG
LGIERKEVGEIEGYINYISVVSLEDLIFSEDDDMPLIGTIEDEKSPSPEKNLEEKEEIEY
LAKGIELLNEKDRMVLSLYYYEELTLKQIGNILSVSESRVCQLHTRAIMHLKKALKKLKY
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcaatagatgggattgtagatgatagagaggctgtaataaaaaaatatataccactt
gttaagtatattgcttcaagggtaataattggtaagagtaagtatatagagtatgaagat
ttggtaggttatggcatgataggacttatggatgccttaaagaagtttgatcatagtaaa
ggaatgaagttttcaacatattcatctataagaataaagggagctatgatagacgaatta
agaaagaatagtcctatctctaagggagctatggacaagctaaataagtataatttagta
gttgaaagattagaaaaagaattatgtagagaaccaacagagttagaaattgcaagtggt
cttggtattgaaagaaaagaagttggtgaaattgaagggtacattaactatatatcagtt
gtatctctagaagatttaatattttcagaggatgatgatatgcctttaataggaactata
gaagatgaaaaaagtccaagtcctgagaaaaacttagaggaaaaagaagagattgagtat
cttgcaaagggtatagagcttcttaatgagaaagatagaatggttttatcattatattat
tatgaagaattaactttaaagcaaataggaaatattctaagtgtatcagaatcaagagtt
tgtcagcttcatactagggctataatgcaccttaaaaaagcgcttaaaaaattaaaatat
gaataa

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