Clostridium felsineum DSM 794: CLFE_021330
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Entry
CLFE_021330 CDS
T08216
Symbol
dinG_1
Name
(GenBank) 3'-5' exonuclease DinG
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cfb
Clostridium felsineum DSM 794
Pathway
cfb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLFE_021330 (dinG_1)
09124 Replication and repair
03420 Nucleotide excision repair
CLFE_021330 (dinG_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfb03021
]
CLFE_021330 (dinG_1)
03036 Chromosome and associated proteins [BR:
cfb03036
]
CLFE_021330 (dinG_1)
03400 DNA repair and recombination proteins [BR:
cfb03400
]
CLFE_021330 (dinG_1)
Enzymes [BR:
cfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CLFE_021330 (dinG_1)
Transcription machinery [BR:
cfb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLFE_021330 (dinG_1)
Chromosome and associated proteins [BR:
cfb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CLFE_021330 (dinG_1)
DNA repair and recombination proteins [BR:
cfb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLFE_021330 (dinG_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
URZ16086
LinkDB
All DBs
Position
2248680..2251058
Genome browser
AA seq
792 aa
AA seq
DB search
MEETSKVKVKISVRNLVEFVLRCGDLDNRFTGGNSRAVEGTKIHSKLQAKNKKIAKEKEN
YTYDSEVFLKYEVSYEDVEFVIEGRADELFIEENKVTINEIKSTGRELKLIDENFNMVHW
AQVICYGYIYANENNIKELTVSLTYFNIEDEDTKVLQKEASVDYLEKEFFSYLKKYVYWA
KDSIGWKEIRKEAIKKCEFPFENYRKGQRELAVSVYRTIRQKKKLFVKAPTGIGKTISTL
FPAIKVLEEEEIEKIFYLTAKGTTAISAASAVKLMAEKGLRLRTLILTSKEKICFNDEVN
CNPDECVYAKGHYDRVNAALKDILQNEDTYTKEEVELYAKKYNVCPFELSLDITSLCDLI
ICDYNYVFDPSVYLKSFFSDAKGNYVFLIDEAHNLPDRAREMYSSELYKSKVMYIKKNLS
KKDYIYKSINSINTFFVKMKKLSEDKGFFVDEELEYEEAAKAVYKFLNKCEKWIAENKDH
EIYKEIQEFYLEAFKFIKTYELYGDNYIFYGEKVSKDFKIKLFCLDPSKFIKGIAEKGIS
AVFFSATLSPMNYFREILGAEEGDYNVTFNSPFSEDNRVIFIARNISTKYQYREKNYDSV
VQYIKSFVKGKRGNYMVFFPSYKYMRDIYDRFSDIKGYNTIIQESNMNEIEKNEFLASFD
KVEDEGVIGFCVLGGIFSEGIDLKGEKLIGAVVVGVGLPMICLERDMIKKYFNSKNNLGY
EYSYMYPGMNKVLQAAGRVIRSENDKGAIMLLDERFATYNYRKLMPCEWEKAIISKENLE
IEKKLEKFWADC
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacttcaaaggttaaagtaaaaatatctgtaagaaatttagttgagtttgtt
ttaagatgtggtgatttagataatagatttacaggtggaaattctagagcagtggaaggt
actaaaattcattcaaagcttcaggccaaaaacaaaaaaatagctaaggaaaaggaaaac
tatacctatgactcagaggtatttttaaaatatgaagtatcatatgaagatgtggagttt
gtaatagaaggaagagcagatgaactttttatagaagaaaataaggttactataaatgaa
ataaaaagcacaggaagagaacttaagctcattgatgaaaactttaacatggttcactgg
gcacaggtaatatgttacggatatatttatgcaaatgagaataatattaaagagttaact
gtaagccttacttattttaatatagaagatgaagatactaaggtgcttcaaaaagaggct
tccgtagattatcttgaaaaggaatttttttcataccttaaaaagtatgtttattgggca
aaggattctataggatggaaagaaataagaaaagaagctataaaaaaatgtgaatttcct
tttgaaaattatagaaaaggtcaaagagagctggcagtttctgtgtatagaaccattagg
cagaagaaaaagctttttgtgaaggcacccacaggaataggaaaaacaatttcaactctt
tttcctgccataaaagtattagaggaagaagaaattgaaaaaatattttatcttacggca
aagggaactacggcaatatcggcagcttcagcagtaaagcttatggctgagaagggactt
agacttagaaccttaattttaacttcaaaggaaaaaatatgctttaatgatgaagttaat
tgtaatcctgatgaatgtgtttatgcaaaaggtcattatgatagggtaaacgctgcactt
aaagatattctccaaaatgaagatacctatacaaaagaagaggtggagctttatgcaaag
aaatataatgtatgcccttttgaattatctttagatataacttcattgtgtgatcttata
atatgtgattataattatgtgtttgatccttctgtatatttaaagagctttttttctgac
gcaaagggaaattatgtgtttttaatagatgaggcgcataatcttccggatagagctaga
gaaatgtattcttctgagctttataagagcaaggttatgtatataaaaaagaatttatca
aaaaaagactacatatataaaagtataaacagtataaatacattctttgtaaaaatgaaa
aagttgagtgaagataaaggtttttttgttgatgaagaattggaatacgaagaggcagct
aaggcagtttataagtttttaaataaatgtgaaaaatggattgctgaaaataaagaccat
gaaatttataaagagattcaggagttttatcttgaggcgtttaaatttataaaaacctat
gaattatatggtgacaattatattttttatggagaaaaggtgtctaaagattttaaaata
aaactgttttgcctagatccttctaagtttattaagggaatagctgaaaaaggtataagc
gctgtgttcttttcggctacccttagtcctatgaattattttagggaaatacttggagca
gaggaaggggattataacgttacctttaattctcctttttcagaagacaatagagtgata
tttattgcaagaaatatttctactaaatatcagtatagggaaaagaactacgattcagta
gtacagtatataaaatcttttgtaaaaggaaaaaggggtaattatatggtgttttttcct
tcatataaatatatgagagatatatacgatagatttagtgatataaaaggctataatact
ataatacaagaaagcaatatgaatgaaatagaaaaaaatgaatttttagctagctttgat
aaagtagaagatgaaggagttataggcttttgtgtactgggtggtatattttcagaagga
attgatcttaagggtgaaaaactcataggagctgtggtagttggtgttggactacctatg
atttgtttagaaagagacatgataaagaaatattttaattctaagaataatttaggttat
gaatattcatatatgtatccaggaatgaataaagtccttcaagctgcagggagggtaata
cgctccgaaaatgacaagggggcaattatgcttttggatgaaagatttgcaacctataat
tatagaaagcttatgccatgtgagtgggaaaaggccataataagtaaggaaaatttagaa
attgaaaaaaaattagaaaaattttgggcagattgctaa
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