Clostridium felsineum DSM 794: CLFE_022890
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Entry
CLFE_022890 CDS
T08216
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cfb
Clostridium felsineum DSM 794
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfb03016
]
CLFE_022890 (truB)
Enzymes [BR:
cfb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLFE_022890 (truB)
Transfer RNA biogenesis [BR:
cfb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLFE_022890 (truB)
Prokaryotic type
CLFE_022890 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF4315
Motif
Other DBs
NCBI-ProteinID:
URZ16242
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Position
2409331..2410200
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AA seq
289 aa
AA seq
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MDGIINIFKPTGVTSFDVVRKVKKISKEKKVGHTGTLDPLASGVLPVCIGKSTKIVDLVM
AGKKVYDAEMKLGEITDTYDREGKVLREAKVNLTNKEIIDAVMSFKGEISQVPPMYSALK
VNGVKLYDLARKGIEIERTSRNVTIYDMNILNIDIPFVKFRVECSKGTYIRSLCYDIGEA
LGCGAMMYNLTRISSGIFNESKSIHLDNLNEANFSENIIPIDKCLINYEKFIVDEKFEKL
LINGVNISDKRLVSKILDKKIYRVYNIEKKFLGLARLNENGFKMIKLLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggtataataaatatatttaagccaacaggagttacatcttttgatgtagtgaga
aaagtaaaaaaaatttcaaaagaaaagaaagtagggcatacagggacacttgatccattg
gcatcaggtgttttgcctgtttgtattggaaagtctactaaaattgtagacttagttatg
gcaggaaaaaaagtatatgatgcagagatgaaacttggagaaataactgatacttatgac
agagaaggaaaagttttaagagaagccaaggtaaacttgacaaataaagaaataatcgat
gcagttatgagttttaaaggtgaaatttctcaagtgccaccaatgtattcagcccttaaa
gtaaatggtgtaaaactctatgatttagctagaaaaggtatcgaaatcgaaagaacctca
agaaatgtaactatatatgacatgaatattttaaatatagacataccttttgttaagttt
cgtgttgaatgttcaaagggaacctacataagaagtttatgttatgatataggagaagct
ttaggttgcggagcaatgatgtacaatcttacaagaatatcttcaggaatttttaatgaa
tctaaaagtatacatttagataatcttaatgaggcaaacttttcagagaatataattcca
attgataaatgcctaataaattatgagaaatttatagtggatgaaaagtttgaaaaattg
ttaataaatggagtgaatatctccgataaaagattagtttcaaaaattttggacaaaaaa
atatatagagtctataacatagaaaagaaatttttgggtcttgcacgtttaaatgaaaat
ggatttaaaatgattaaattactaacttag
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